| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1614 |
|---|
| Symbol | |
|---|
| ID | 7285313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1938647 |
|---|
| End bp | 1939408 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643582423 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_002480191 |
|---|
| Protein GI | 220904879 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0547221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAG AGCATTCCAC GCCCACCGCC ACGCCTACAG CTCTTGTGAC GGGCGGTTCG
CGCGGCATAG GGCGGGCCAT TGCCCAAACC CTTGCCCGGG ACGGCTTTCA GGTTTTTCTC
ACCTATGTGA GCCGCCCCGC AGAGGCGGAG CAGGTGGTGG ATGAAATCAG GGCGGCGGGC
GGCCAGGCCA GGGCTTTTGC CCTTGATGTG AGCGACGGCG TCGCTGTTTC CGATTTTTTC
ACGACAGAGA TCAAAGACAA GGTTGATCTT GCCGTGCTCG TGAACAATGC GGGCATCACC
AAGGACGGTT TTCTTATCCG CATGAAGGAT GAGGACTTTG ATCGGGTAAT CAACGTCAAC
CTGCGCGGGG CCTTCATCTG CATCCGCGAG GCCGCCAAAA TCATGAGCAG GGCCCGCAAG
GGTCGTATTG TAAACATTTC TTCGGTGGTG GGCCAAATGG GCAACGCCGG TCAGGCCAAC
TACGCCTCGG CCAAGGCCGC CCTGCTGGGT CTCACCAAGT CCTGCGCCAA AGAACTGGCC
GCACGCCAGA TCACGGTCAA CGCCGTGGCT CCCGGCTTTA TTGAAACGGA CATGACCGCC
GCCCTCGGCG ACGATGTGCG TAAAAGCTAT GAGGAAGTTA TCCCGCTCAA GCGCATGGGC
ACTGCCCAGG AAGTGGCCGA TGCCGTGGCT TTTCTCGCCT CGGACAGGGC CGCCTACATT
ACCGGGCAGG TGCTTGGAGT GAATGGGGGC ATGTACTGCT AG
|
|---|
| Protein sequence | MSTEHSTPTA TPTALVTGGS RGIGRAIAQT LARDGFQVFL TYVSRPAEAE QVVDEIRAAG
GQARAFALDV SDGVAVSDFF TTEIKDKVDL AVLVNNAGIT KDGFLIRMKD EDFDRVINVN
LRGAFICIRE AAKIMSRARK GRIVNISSVV GQMGNAGQAN YASAKAALLG LTKSCAKELA
ARQITVNAVA PGFIETDMTA ALGDDVRKSY EEVIPLKRMG TAQEVADAVA FLASDRAAYI
TGQVLGVNGG MYC
|
|---|
| |