Gene Ddes_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1609 
Symbol 
ID7285308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1934406 
End bp1935038 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID643582418 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002480186 
Protein GI220904874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.127652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCG TGGATGTTGC TCTGGCGTTT TTCGCCGCCT CCCTTCTTCT TGGCATCGCC 
CCCGGGCCGG ACAATATTTT TGTGCTCACG CAGTCCGCAG TTTACGGCGC AGGCGCAGGT 
GTGGTCACCA CTCTGGGGCT GGTCACCGGT CTCTGCGTGC ACACGGCTGC CGTGGCGCTG 
GGGGTGGCCG CCATCTTTCA AAGCTCCCCG ATGGCTTTTA CCCTGCTCAA GACCGTGGGC 
GCGGCCTACC TGCTGTGGCT TGCCTGGCTT TCTTTCAGGG CCGGAGCTTC ACTGGCGCTT 
ACCGGAGGCG GCGGAACACC CTTTCCCGGT TATGCGGCCC TGTACCGGCG CGGCATTGTC 
ATGAATGTGA CCAATCCCAA GGTTTCACTC TTCTTTCTGG CTTTTTTGCC CCAGTTCTGC 
GATCCCTCCA GAGGCAGTGT GGCCCTGCAG GTTCTTGGTC TGGGTCTTTT ATTCATGCTG 
GCAACCCTTA TGGTTTTTTT CAGCGTTGCC CTGCTTGGCG GCAGGCTGGC CCTGTGGTTC 
AACAAGGCCC CCGGCGGGCA GATACTCATA CACCGCGCTG CAGGCCTTGT TTTTGCGGGT 
TTGGCCCTGC TTCTGCTGTT CAGCGGCAAA TAG
 
Protein sequence
MLTVDVALAF FAASLLLGIA PGPDNIFVLT QSAVYGAGAG VVTTLGLVTG LCVHTAAVAL 
GVAAIFQSSP MAFTLLKTVG AAYLLWLAWL SFRAGASLAL TGGGGTPFPG YAALYRRGIV 
MNVTNPKVSL FFLAFLPQFC DPSRGSVALQ VLGLGLLFML ATLMVFFSVA LLGGRLALWF 
NKAPGGQILI HRAAGLVFAG LALLLLFSGK