| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1573 |
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| Symbol | |
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| ID | 7285271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1893496 |
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| End bp | 1895139 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643582382 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002480151 |
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| Protein GI | 220904839 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAT TCATCCAACA GTTTATCAAT TCTTTCAAAG CAGTATGGGC AAAGATGAGC
CATCTGCAAC GCATGGCCGC CGCAGGCGGG GCCGTGGCTC TGCTGGCCGG TATTATTGGG
CTTTCCATCT GGATGGGCCG CCCCGAGTAC CGCGTTCTTT ATTCCAATCT TGGCCCCGAA
GACGCCAGCG TGGTGGTCAA GGCCCTGCAG TCCGACAAGG TGGCCTACCG CATTACTGAT
AACGGAGCCA CCATCATGGT TCCGCAGGAA GTGGTATACG ACCAGCGCAT CAAGATCGCG
GGCGAAGGCG GTCTGGTGGG GCAGGGAATC GGTTTTGAAA TTTTTGACAA GGTCAAGGTC
GGTCAGACAG ACTTTGTGCA GAAAATAAAC TATACCCGCG CCCTTCAGGG CGAACTGGCC
CGCACGATCA GCGAATTTCC CAGTGTGGAA AGTGCGCGAG TGCATCTGGT CATCCCCCGC
CGCAGCCTTT TTGTCGAAGA GCGCCAGTCG CCTTCGGCTT CGGTGGTGCT CAAGCTTATT
CGCCCCAACA TCAAGGTTGA CCAGAAAGAA ATCAACGCCA TCCTCAATAT GATGCTCATG
TCTGTGGAAG GCCTGGACAG GGGGCATGTT TCCATTACCG ATACCAGCGG CAAGGTGCTC
TACCAGCCGG AGGAAGACAG CCTGGCGGGC ATTACCACCA CGCAGATGGA ATACCGTCAG
ACCGTGCAAC GCAATCTTGA ACGCCGTATC GAAGAAATGC TCCAGCCCCT TTTTGGCCCT
GGCCGCGTCA TTGCCAAGGT CAACGCTGAT ATGGACTTCA GCCAGAAAAC CATACGCCGC
GAACTGTTCG ACCCCGAAAG AACGGCTGTG CGCAGCGAAT ACCGCAGCGA AGAAAGCCAG
CAGGGGCGCG CCAACCTTGA GGCAGGCTCG CCAGATGTGA ATTTTCGCGG CGACGGCATC
ACCGGTTCTG TCTCTGACCA GAGCGGAACC CGTGAAGCCC GCACCACCAA CTACGAAATC
AACAAGGAAG AACAGCAGAT TGTGTCCAAC GTGGGAGAAT TGCGCCGCCT GACGGTTGCA
GTCCTCATTG ATGGCACGTA TGTAAAGGCC GATGGCGCGT GGACGTTTAT GCCGCGCAAA
AGCGAAGAGC TTGAACAGGT GCGTCAGCTT GTTCATAATG CCGTGGGGCT GGATACGGGC
CGGGGCGACG CGCTGGAGGT CAGCTCCGCG CCCTTTACCG ACTCCGAGCC GCCCAGGGAC
CCGAATTTTG CCGACATGCT GGCTGACTAT GCCGAACGTC TGGGCAAGCC CCTGCTTAAT
GCCCTGCTGG CCTTCCTGTT CCTGATGCTT ATAGTGCGGC CTGTGGTGCT GGCTCTTATC
CGGCCCAAGG TTGAGGCCGG TGAAATGGTG GAAGGCCTGG AAGGCCTGCC CGCCGCCGAA
GAGCAGCTCG CTCTGTACGA GGCGCTGGAA GAAGCCGCCA GAACAGAAGA CGAGGTGCCG
CAGGAAGACG ACGAGGACGA TCTGGTGTTC AAGGACATTG AAGCCCTGAA AGCGCACATC
TTTACCCTGT CCGACAATCA TATGGAACAG GTGGTTACCC TGGTGCGCGG TTGGATGAAG
AACGATGAAG CAGTTAAAGC CTAG
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| Protein sequence | MPAFIQQFIN SFKAVWAKMS HLQRMAAAGG AVALLAGIIG LSIWMGRPEY RVLYSNLGPE
DASVVVKALQ SDKVAYRITD NGATIMVPQE VVYDQRIKIA GEGGLVGQGI GFEIFDKVKV
GQTDFVQKIN YTRALQGELA RTISEFPSVE SARVHLVIPR RSLFVEERQS PSASVVLKLI
RPNIKVDQKE INAILNMMLM SVEGLDRGHV SITDTSGKVL YQPEEDSLAG ITTTQMEYRQ
TVQRNLERRI EEMLQPLFGP GRVIAKVNAD MDFSQKTIRR ELFDPERTAV RSEYRSEESQ
QGRANLEAGS PDVNFRGDGI TGSVSDQSGT REARTTNYEI NKEEQQIVSN VGELRRLTVA
VLIDGTYVKA DGAWTFMPRK SEELEQVRQL VHNAVGLDTG RGDALEVSSA PFTDSEPPRD
PNFADMLADY AERLGKPLLN ALLAFLFLML IVRPVVLALI RPKVEAGEMV EGLEGLPAAE
EQLALYEALE EAARTEDEVP QEDDEDDLVF KDIEALKAHI FTLSDNHMEQ VVTLVRGWMK
NDEAVKA
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