Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1567 |
Symbol | |
ID | 7285265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1883844 |
End bp | 1885547 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643582377 |
Product | histidine kinase |
Protein accession | YP_002480146 |
Protein GI | 220904834 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAG TCGCTCCCGC GCCCCATCGC GGGTACAAGG TCATCTATCG CCGCCTGCTC GTTACGCTGC TGCTTATGGC GCTCACGCCG CTGGTGGCTC TGGGGCTGTT CTGCCTGGAC AGGCTGAGCG CCATCTATGA CGAAAAGATC AGCGCGGGCA TCGAGGCTGT AGCCAGCAGC AAACACCGCG CGCTGGATAC ATTTATGGTG GAGCGCATCG CCCAGATAAA AAATCTGGCC TTCACCCATC CTTATGCAGA ATTGAGCAAT TCCGCGCGTC TGAGCGATAT CTTCAGCATC ATGCAGAACA ACAGCCGCTC CTTTGTGGAT GTGGGTGTCA TCGGCATGGA CGGCCGCCAT GTCTCCTATG TGGGACCATA TGACCTCAGC GACAACAATT ACTCCGACAC TCCCTGGTTC AGAGAGGTGC TGCGCAAGGG TGTGTATGTG AGTGATGTGT TTATGGGCTA CAGGAACGAG CCTCATTTCA TCATAGCGGT GCTGCGGCAC GAGGGGGGGC GCAGCTACAT AGTACGGGCT ACCATTGATA TGGACGCTAT GGGGGCCTTG CTGCGTCGCG TGTATTCCGG TCCGCACAGC GATGCCTTTC TGGTCAATGC CAGAGGCGAG CTCCAGACGG ATTCGCGCTA TCACGGCAAA AGCATGGCGC GGTTTGGTGT GCCACTGCCG GATATGACCC GCAAAAATGT GTCCACCCAG CATCTGACCA CATCCAAAGG GCAGGAAATG CTGGCCGCCA TGATGCCTCT GGAGTCCATG CCCTGGGCGC TTGTGGTGCT TGATGATGTG CGTGACAGCC TCCAACCGTT ACGGCAACTC AAAGCGCTGA TTGTTTTTTT CATGATTCTG GGCAGCGGGC TTATCTGTAT GGGGGCCGAA CTCTGCACCC GGCGGCTCGT GGCTTCGCTT GAAGAGTCTG ACCAGAAACA GGCCCATATC GATGCCCGCA TGCTTCAGTC CAGCAAAATG GCGGCCCTTG GCAAAATGGC CGCCGGGGTG GCCCATGAGG TAAACAATCC CCTTATGCTC ATTCAGGAAA ATGCGGGCTG GATACGTGAC CTGCTGGACG ATGAAAAACC CGAAGCAATG AAAAATTATC AAGAAATACT GGAAAGTACA GAAAAAATTG ACCAGCATGT CAAGCGCGCC AAAGGCATAA CCCAGCGCAT GCTCGGCTTT GGCCGCCGCA TGAACCCCGG CCGTACGGAA ATACTGATCA ACTCCCTGAC GGATCAGGCT GCTGAAATGC TTAAAACAGA AGCCACCAAT CGCAATATTG ACATTATCAG AGAGTATGAT CCGCAGGTGC CGGTTATCCT GTCAGATCCC GCGCAGCTTG AGCAGATTTT TATCAATATT ATCGACAACG CCATTGATGC CATCGGCAAA AACGGCTCTC TGACCATTCG CACCCTTGCC TGGAAGAAGG GTGTTCGCAT ATTGTTTACC GATAGCGGTC CCGGTATGGA TCAGGAAACC GTAACCCGTA TTTTTGATCC TTTTTTTACT ACCAAGAAGG TGGGCGAGGG TACGGGCCTT GGGCTGGCTA TCTGTTATAC CATACTTGAA AAGCTGGGCG GCCGCATTGA GGTGCAGAGC CGGCTGGGAG AAGGAACCAC CTTCAGCATA ACCCTGCCCG CCGAACCGCC GCAGCTTCCG CCGGAAGACG GTCTGCCAGC CTGA
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Protein sequence | MSAVAPAPHR GYKVIYRRLL VTLLLMALTP LVALGLFCLD RLSAIYDEKI SAGIEAVASS KHRALDTFMV ERIAQIKNLA FTHPYAELSN SARLSDIFSI MQNNSRSFVD VGVIGMDGRH VSYVGPYDLS DNNYSDTPWF REVLRKGVYV SDVFMGYRNE PHFIIAVLRH EGGRSYIVRA TIDMDAMGAL LRRVYSGPHS DAFLVNARGE LQTDSRYHGK SMARFGVPLP DMTRKNVSTQ HLTTSKGQEM LAAMMPLESM PWALVVLDDV RDSLQPLRQL KALIVFFMIL GSGLICMGAE LCTRRLVASL EESDQKQAHI DARMLQSSKM AALGKMAAGV AHEVNNPLML IQENAGWIRD LLDDEKPEAM KNYQEILEST EKIDQHVKRA KGITQRMLGF GRRMNPGRTE ILINSLTDQA AEMLKTEATN RNIDIIREYD PQVPVILSDP AQLEQIFINI IDNAIDAIGK NGSLTIRTLA WKKGVRILFT DSGPGMDQET VTRIFDPFFT TKKVGEGTGL GLAICYTILE KLGGRIEVQS RLGEGTTFSI TLPAEPPQLP PEDGLPA
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