Gene Ddes_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1564 
Symbol 
ID7285262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1878993 
End bp1879964 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID643582374 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_002480143 
Protein GI220904831 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0511453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAG CCCGTGTATA CGTGACCCGT GCCCTTTTGC CTGAAGCTTT CACCCTGCTG 
CGCTCACGTT GCCATGTAGA CGTGGGGCCG GAAAATGGCC TTCGCGGTGA GGATTTTGTG 
GAGGCCCTGC GCGGGGCTGA TGCTGTTATC GCCACCTCGG TGCGTCTTGG GCCTGAGGCC 
TTGGACGCTC TGGCGTCTTC CTGCAAGGTT ATTTGCAGCT ACGGGGTAGG GTATGACCAT 
ATTCCTGTGG AGGAAGCTAC CCGCCGCGGT ATATGGGTGA CGCACAATCC CGATGCCGTC 
ACTGCGGACA CGGCGGATCT GGCCATGGCG CTCATGCTGG GGGTGGCCCG CAGATTGCGC 
GATTGCGATC TCAGTGTGCG CAATGGCGTG GCCCCCTGGG GCGTGGCCAT GCATATGGGG 
CTGCGCGTGA GCGGCAAGGT GCTTGGGCTT GTGGGCAGTG GGCGTATAGC CCTGGCAGTG 
GCGCGGCGCG CACAGGGGTT CGGCATGCGC CTTGCCTATA CCGGCCGACG CAGAAATGAA 
ATATTTGAGG CCGCCACGGG GGCGTGTTAT CTGGACAAGA AAGAATTGCT GGCATCATCG 
GATTTCGTGA GCCTGCATAT CCCGCTGACG CCTGAAACGC GGCATTATAT GGCGGCGGCG 
GATCTGGCGT TGATGCCGCC GCATGCCGTG CTCGTCAATA CCGCACGCGG GGCGGTGGTG 
GATGAAGAGG CCCTGGTGGA AGCTCTTGAA GGAGGCCGCC CTGGCGGCGC AGGGCTGGAT 
GTTTTTGAGC GTGAACCGCA TGCGCATCCG GGGCTGCGCA TGCTGCCCAA TGTGCTGATG 
ACGCCACATC GCGGCGTAGC CACGCCGGAT TCCCTGATAG ATATGGGGGA GGCTTGTGCA 
CACAAAATTT TTGATGCGCT GGACGGTAGG CTGCCGCAAG ACTGCCTGAA CCCACACGCC 
CGTAAGGCAT GA
 
Protein sequence
MTKARVYVTR ALLPEAFTLL RSRCHVDVGP ENGLRGEDFV EALRGADAVI ATSVRLGPEA 
LDALASSCKV ICSYGVGYDH IPVEEATRRG IWVTHNPDAV TADTADLAMA LMLGVARRLR 
DCDLSVRNGV APWGVAMHMG LRVSGKVLGL VGSGRIALAV ARRAQGFGMR LAYTGRRRNE 
IFEAATGACY LDKKELLASS DFVSLHIPLT PETRHYMAAA DLALMPPHAV LVNTARGAVV 
DEEALVEALE GGRPGGAGLD VFEREPHAHP GLRMLPNVLM TPHRGVATPD SLIDMGEACA 
HKIFDALDGR LPQDCLNPHA RKA