| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1562 |
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| Symbol | |
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| ID | 7285260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1877397 |
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| End bp | 1878074 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643582372 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002480141 |
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| Protein GI | 220904829 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0127302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGATT TTGACTGGAG CATCATTGAA CAAAGCCTGC CGCTGCTGCA AAAGGGCATT
CTGGTAACGC TCAAGATAAC GATCACGTCC ATCATTCTGG GCATGGTGCT CGGCACACTT
CTGGCTGTGG CCCGCATTTC CATCTATGCG CCCTTGCGCT GGCTTGCAGC GGCCTATGTC
AACTGCTTCC GCTCCATCCC CCTGGTTATG GTGTTGTTGT GGTTTTATCT TATCGTACCG
CAGTTTTTAA CGAAATTTCT TAATCTGTCT CCTCTGACCG ATATCCGCCT TGTTTCCGCC
ATGGTGGCCT TTACCGCTTT TGAGGCCGCG TATTATTCTG AAATCATCCG GGCGGGCATG
AACAGCGTCT CCAGAGGGCA AAACTACGCG GCCCTTGCCC TCGGCATGAC CAAGTCGCAA
ACGCTCATCT ATGTCATTCT GCCGCAGGCT TTCCGCGTCA TGACGCCCCT GCTGCTCACA
CAGGGCGTGA TTTTGTTTCA GGACACGGCC CTTGTATACA TCATAGGCCT TGCGGACTTT
TTCCGCACTG CCACCAACAT AGGCAAAACC ACCGGCTATG AAATAGAAAT GGTGCTCTTT
GCGGGCGCCG GCTACTTTGT TGTCTGCTTC TGCGTTTCCC TGGCCGTAAC CGTGGTAAAA
AAGAGACTCA AGCTATGA
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| Protein sequence | MLDFDWSIIE QSLPLLQKGI LVTLKITITS IILGMVLGTL LAVARISIYA PLRWLAAAYV
NCFRSIPLVM VLLWFYLIVP QFLTKFLNLS PLTDIRLVSA MVAFTAFEAA YYSEIIRAGM
NSVSRGQNYA ALALGMTKSQ TLIYVILPQA FRVMTPLLLT QGVILFQDTA LVYIIGLADF
FRTATNIGKT TGYEIEMVLF AGAGYFVVCF CVSLAVTVVK KRLKL
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