| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1538 |
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| Symbol | |
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| ID | 7285236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1836812 |
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| End bp | 1838503 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643582349 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002480118 |
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| Protein GI | 220904806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000498479 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAATTTTGA GTGGGTAAAC AGTATGTTGG ATGTATTTCT TCCAATTCGT
ATCCTGCTCT TACTGACTGT TTTTATGGGA TTTTTTTCGC CCCTTGCCGC CGTGGCCTCC
GTAACCGGGG CTGACGCAGC AAAAAAAGAA AATTTTGAAA CGCCCGTGGA CGGAGGCCGT
ATCCTTTTCG GCAGCATTGG TGAAGCCTCC AACCTTATCC CCTACCTTTC GGCTGACTCC
GCTTCACACG AGGTCGCGGG GCTTATTTAT GTGGCGCCCC TGCGTTATGA CAAGGACCTT
CAGGTAGAAC CCTGGGCCGC AGAAAGCTGG AGTATGGAAG ACGAAGGGCG GCTTATGCGC
TTTACCCTGC GCAAGGGGAT CCTGTGGGAA GACGGTGTCG AGCTGACTGC CGAGGACGTG
GCCTATACCT GCAAGGTAGT GGCGGATCCG GCCACGGGAA GCCCCTATGC CGAAGATTTT
TCGCGCATCA AGGAACTCCG GGTTATTGAC CGCTATACGT TTGAAGTCCG TTACGAGCAT
TTTTTTGCGC GCGCCGTTTC TTCGTGGATG CAGCCCATAT TGCCCCGGCA TCTGCTTGAT
GGGCAGGATA TCCGCAACAG CCCGCTCACA CGCAAGCCGG TGGGGGCGGG ACCGTACAGG
CTCAAGGCCT GGGAGCCGGG CAGCCGTATT ATTCTTGAGG CTTCGCCCAC CTATTTTGAT
GGCAAGCCCT ACATAACCGA AGCCGTGTAC CGCATCATTC CCGATGGCGC GACCATGTTT
ATGGAGGCGC GCGCCGGGCG GCTGGACATT ATGGATCTTT CTCCCCTGCA GTATCTGCGG
CAGACCTCCG GCCCCATGTG GGAGCGCGAG TTCAACAAGT TTCGCTATCT TGCCTCGGCC
TACGTGTTTC TGGGCTTTAA CCTGCAACAT CCGTTTTTTG GGGATGTGCG GGTGCGCAGG
GCCATTTCCC AGGCCATCGA CCGGGACAGC ATCATCCAGG GGGTGCTGCT CGGGCAGGGC
ATACCGGCCT TCGGGCCTTT CAAGCCCGGG GTCTGGGCCT ATCATCCGAC CCTGAAGCCC
ATACCGCAAA ATGTGGCCGC CGCACGCGCC CTGCTGGCCG AGGCCGGTTT TACCGACAGC
GATGGCGACG GCCTGCTGGA CAGGGACGGC AAGCCCTTTT CTTTTACCAT ACTGACCAAT
CAGGGCAACG AGCAGCGTAT CCTCACGGCC ACGGTCATAC AGGCGCAGCT CAGAGCCATC
GGCATTGACG TGCATATCCG CACGGTGGAG TGGGCGGCCT TTATCCGCGA ATTTGTCAAC
AAGGGCCGTT TTGACGCCAT TATTCTTGGC TGGACCATTC CACAGGACCC GGATATCTAT
CAGGTATGGC ACTCATCGCA GGCTGTTGAA GGCGGCCTTA ACTTTACCTA CTATAAAAAT
CCCGAAGTGG ACAGGTTGCT GGAAGAAGCG CGCTCCATCC CCGATCAGAG CACGCGCGCC
CGCCTGTACT GTCGCATTCA GGAAATACTG GATGCGGAAC AGCCCTACTG TTTTTTGTAT
GTTCCCTACG CGCTGCCTGT GGTGCAGAAG CGTTTTCAGG GCGTCAAGCC GGCTCTGGCT
GGCCTGATGT ACAATTTTGA AAAGTGGTGG GTTCCGAAAG AATTACAACG GCACAGCCTC
TCGGCGGACT AG
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| Protein sequence | MKKINFEWVN SMLDVFLPIR ILLLLTVFMG FFSPLAAVAS VTGADAAKKE NFETPVDGGR
ILFGSIGEAS NLIPYLSADS ASHEVAGLIY VAPLRYDKDL QVEPWAAESW SMEDEGRLMR
FTLRKGILWE DGVELTAEDV AYTCKVVADP ATGSPYAEDF SRIKELRVID RYTFEVRYEH
FFARAVSSWM QPILPRHLLD GQDIRNSPLT RKPVGAGPYR LKAWEPGSRI ILEASPTYFD
GKPYITEAVY RIIPDGATMF MEARAGRLDI MDLSPLQYLR QTSGPMWERE FNKFRYLASA
YVFLGFNLQH PFFGDVRVRR AISQAIDRDS IIQGVLLGQG IPAFGPFKPG VWAYHPTLKP
IPQNVAAARA LLAEAGFTDS DGDGLLDRDG KPFSFTILTN QGNEQRILTA TVIQAQLRAI
GIDVHIRTVE WAAFIREFVN KGRFDAIILG WTIPQDPDIY QVWHSSQAVE GGLNFTYYKN
PEVDRLLEEA RSIPDQSTRA RLYCRIQEIL DAEQPYCFLY VPYALPVVQK RFQGVKPALA
GLMYNFEKWW VPKELQRHSL SAD
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