| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1516 |
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| Symbol | |
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| ID | 7285214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1809375 |
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| End bp | 1811447 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643582327 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002480096 |
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| Protein GI | 220904784 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.18651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTGTA GGCGCGTGTT ATTCCTGCTC GCGATACTGC TGTTGCAGGC AGGTGGCGCA
TGGGCGCAGG AAGAGGGGGC CACGGAAGTT TTGTTGACGC CGCTTGAGAT GACAGAGCCA
AAGAATACTA TCGACCACAT CACCCAGACA GATATGGAAA GAAAAACGGC CCTCAATCTG
TGGGAAGCGC TCAGAGGAGT ACAGGGCGTA TACTTGCAGA CTTCTGCCGG CCGTAATGAA
GGAACCATAA GCATTCGCGG TTCAAATCGT TATCAGGTGG GTATGTATGT TGACGATATA
CCTGTCGCCA CTGCGTATCG TAATGAGTGG GACTACAATA ACACCCTTAC CTATGGTCTT
GAGTCGGTAG ATGTATCCAA GGGCTACAGT TCGCCTTTGC TTGCAAGTAA TAACAACCTG
GCCGGTGTGG TGAACCTGCG TACCGCCAAG CCCAGAAAAG AATTTGAATT TTCCGCAAAA
TATATGAACT TTTTTGATCG CAGGATGCAT GATCAGGGCA GGATGGTTGC CGCCAGCATA
GGCACGAGAC AAGACCTCTA TTATCTTAAA GGCACCTTTG TTTATGACAA GCAGGATTTT
TTCACTCTGC CGGAAGGATT TGACGCCGCG CCGCAGCAGG GTACGGGACG CCGGAAAAAT
TCCGACCACA AGAACATGAG TGCCAACATC ATCGGCGGTT GGACCCCCAC CGATGATGTG
GACATTATGG TAGGCTACAT GCGGCAAAGC TTTAAAAAGG GCCAGCCCTT CGATGCAGCC
CAGTACCGCG CCGACGTAAG CGGCAAGCAG ACATACCCCT TTCAGCGCTC GTGGTACTGG
CCGGAGTATG AAACCAGTCG CCTTTATACC AACGCCAACT TTAACCTGAG CAAACAGGCC
CACCTCAAGG CCGTGGTGTA TTACGACTGG CATCAGGACA AATCCGAGAG CTATACCGAC
ATCAACATGA CCAAAAGGGA TTACCCTGAT AAAAAATACG ACCAGTATAC AGTGGGCGGA
CAATTAACCT TTGACTATAC TTTCAATACG GCCAACAAGC TGGCGCTTTC TGCCGGCTAC
CGCATTCTTT CCCATAAAGA ATACAATGAT TATGCAGTGT TTGATGATAG CGGCCTGCCC
AAGAACAAAA AAAAGAAAAA GGCCGACATC GGCGATGAGC TTGATGAGCA TATCACAGAG
GGCTACTGGG ACTTTGGCGC GGAATATACG CTCAAACCCG TTGAGCGCCT GACTCTTGTT
TTTGGCACAA GCCTTAGCAC TATGACTCCC ATGACGCTTG AAAGCCGGGA CCATACCACC
GGGGGCATGC ATTCCTACAA AAATGGTCTG GACGACACCA AAACCCTGTT CAACTACCAG
GTAGGCGCGT TTTATGACCT TACAGAACGG CATGAAATTT TTGCCACTTT TGCGAAAAAA
TCCCGTTTCG CCACCATGCG CGAAAGGTAT TACAGAAACG GCGATACTCC CGCCAACCCG
GACCTGAACC CCGAGCACGC CTACCATTAT GAGCTTGGCT ACAAGGGCCT TATCGGCGAC
TGGCTCAAGC TTAACACCAG CGTATACTAC AGTGACGTCA ATGATATGAT TACGTCCAAG
GGGCCAAAAG GGGCCATGTA TTTTGAAAAC CTCAACAGGG CCACATTTTA CGGTTTTGAA
GCCGGAGCAG AGGCCGTTAT TAACCAGTAT CTGAGTGCGG GCGGCGTGTT CAACTATATG
CGTTGGGATA ACTGCACAAA TGACGAAAAG CTCACCCAAC TTCCTGAAAT GACGAGCACT
CTTTATGCGG TTGTTTCTCC TGTGGAAGGG CTTTCCGTTA TCCCCCAGGT CAATATAAGC
AGCGGCTTTT ACTGGAGCAC CTCAGCGGAT GACGGGCCGT ACAGAAAGTC TCCCAATTTC
GCCACCGTGG ACATCAAGGC CGTGTATGAC ATCACCAAAA ACTTTTCGGT GGAAGCGGGC
GTGAGAAACC TTTTTGACCA GGAATATGCA TACAGTGCGT ATTATCCTGA ACAGGGGCGA
AACTTCTTTG TGGGCGTGAG CGCCAATTTT TAG
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| Protein sequence | MSCRRVLFLL AILLLQAGGA WAQEEGATEV LLTPLEMTEP KNTIDHITQT DMERKTALNL
WEALRGVQGV YLQTSAGRNE GTISIRGSNR YQVGMYVDDI PVATAYRNEW DYNNTLTYGL
ESVDVSKGYS SPLLASNNNL AGVVNLRTAK PRKEFEFSAK YMNFFDRRMH DQGRMVAASI
GTRQDLYYLK GTFVYDKQDF FTLPEGFDAA PQQGTGRRKN SDHKNMSANI IGGWTPTDDV
DIMVGYMRQS FKKGQPFDAA QYRADVSGKQ TYPFQRSWYW PEYETSRLYT NANFNLSKQA
HLKAVVYYDW HQDKSESYTD INMTKRDYPD KKYDQYTVGG QLTFDYTFNT ANKLALSAGY
RILSHKEYND YAVFDDSGLP KNKKKKKADI GDELDEHITE GYWDFGAEYT LKPVERLTLV
FGTSLSTMTP MTLESRDHTT GGMHSYKNGL DDTKTLFNYQ VGAFYDLTER HEIFATFAKK
SRFATMRERY YRNGDTPANP DLNPEHAYHY ELGYKGLIGD WLKLNTSVYY SDVNDMITSK
GPKGAMYFEN LNRATFYGFE AGAEAVINQY LSAGGVFNYM RWDNCTNDEK LTQLPEMTST
LYAVVSPVEG LSVIPQVNIS SGFYWSTSAD DGPYRKSPNF ATVDIKAVYD ITKNFSVEAG
VRNLFDQEYA YSAYYPEQGR NFFVGVSANF
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