Gene Ddes_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1512 
Symbol 
ID7285210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1805261 
End bp1806211 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID643582323 
ProductTonB family protein 
Protein accessionYP_002480092 
Protein GI220904780 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTT GCGGCGTTGC AGAAAAATCC CTCAGTATGG CCAGGACTGA ACAGGTCTGC 
GTGAAAACGG TATTTCCCGG CAACGTGGTA TTTTTTCTGA TTTCTTTGGC TCTGCATACT
GCTGCGCTCG CTGCCTTGTG GTTTCTGGCC GTTCCTGCAG CGGGCATAGG GCAAGGCGAG
GGTGCGGGGG GATATATTAC GGTCAGCCTG CTGCCCGGAC CACCGGGCGA TTCCGGCAGT
GGGGAATCTT CTGCCTCATC GCCGGATGCT GCTGACGGCG CATCCGCATC TGCACCGGCT
ACAGCCGACA GGGCCGTTGA ACCTTCCGCT GCTCCTCCCG CCACGGATAC CGTCCATGCC
GCGGATATTG ATCCGAAAAG GCCTGCTGCC GCCCCGGCAG AGCCGGTGCC CCCTGTTCCT
GCTGCCATTC CCGTGCGCAA GATAAAAGAC GAACAGAAAG CCAAAGCCAA AAACCGAAAG
GCCGAGAGAA CTGTCGTAGA AAAGGCCGCT CCCGAACATG CACGGCGCAC CCTTGATGAC
AGGGAGCAAA AGAGCGGAAG AGCCTCGGCC GCGGGCCGTG AACAAGCAGG TACGGCTGGG
GGACGCGGCG GTCAGGGCGG AGAAAAAGGC GGCGCAGGCG GAAAAAGCAG CGCTGCCGCG
GCTGGAAGCT CCGCCGGATA TCTGAAGGGA AATTACGAAT ATATCAAAAA ACGCGTCAGG
CAGTATCTGG TGTACAACCC GCAGGCCAAG CGTATGGGCA TTCAGGGTAT GGTGACTGTA
GCATTTACCA TTCAGCAGGA CGGCAGGGTC AGGGATGTTG CGGTCAGTAA AAGCAGCGGC
CATTCCCTGC TGGACGAATC CGCCCTTGAG GCGGTGCGCA GCGCAGCGCC TTTTGCAGCG
CCACCGGAAC CGGCGCGAGT GATCATGCCC GTGCAGTTCA GCCTGAGGTA G
 
Protein sequence
MKSCGVAEKS LSMARTEQVC VKTVFPGNVV FFLISLALHT AALAALWFLA VPAAGIGQGE 
GAGGYITVSL LPGPPGDSGS GESSASSPDA ADGASASAPA TADRAVEPSA APPATDTVHA
ADIDPKRPAA APAEPVPPVP AAIPVRKIKD EQKAKAKNRK AERTVVEKAA PEHARRTLDD
REQKSGRASA AGREQAGTAG GRGGQGGEKG GAGGKSSAAA AGSSAGYLKG NYEYIKKRVR
QYLVYNPQAK RMGIQGMVTV AFTIQQDGRV RDVAVSKSSG HSLLDESALE AVRSAAPFAA
PPEPARVIMP VQFSLR