| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1491 |
|---|
| Symbol | |
|---|
| ID | 7285189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1780339 |
|---|
| End bp | 1781466 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643582302 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002480071 |
|---|
| Protein GI | 220904759 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA AACTCTGGCT TCAGCAACTG CTGGCTCTTA TCCGTAAGGA ATTTCAGCAG
ATCGTGCGCG ATCCTTCCTC CTATCTGGTG GCCGGGGTAT TGCCGCTGAT TTTTCTGCTG
CTCTTTGGCT ACGGCATCAC CCTGGATGCG GGGGTGCTGC GCCTTGCAGT GCTTAATGAG
AGCGGTGGCA GGCATTCGCT GGACCTGGCG GCGAATTTTG CCCATTCGCC GTGGTTTTCA
ACCGTTGAAG CCGGCAGCAT GGATGAGGCG GCCCGCTTTA TGCGGGATTC AAAGGTACAG
GGCGTGCTGG TTTTCCGGCA GGATTTCGAT GCGGCACTGG CTCGCGGGGC AGCAGGAGAA
ATTCAGGTAC TGGTCGATGG GGCCGAACCC AATACTGCCC AGTATATCCA GAGCTACAGC
CAGGGGCTGA TAAGCAGGTG GCAGGCCACG GCCTTGCCGG GCGGGGCGGC GCTGGAGGCC
CCCATAAACC TGCAACCGCG CTACTGGTAC AATCCGGCAG CCAAAAGTGT GCAGTTTCTT
GTGCCGGGGG CCATTACCGT CATCATGACG CTTATCGGCA CGCTTCTGAC TTCACTGGTT
TTTGCCCGTG AGTGGGAGCG CGGGACCATG GAGGCCATGT TTGCCACACC GGTAAGCCGC
ATGCAGCTTC TGCTCGGCAA GCTTATTCCC TATTTCTGCA TGGGCATGTT CAGCATGGCT
CTCTGCGCCG GGGCTGCGGT ACTGCTTTTT TCCGTGCCGT TTCGCGGCTC GTGGTGGGTT
TTGCTGGTTA TTTCTTCTGT TTTTATGCTC AGTGCTCTTG GGCAGGGCCT GCTTATTTCC
GTCACCCTGC GCGGGCAGCT TGTGGCCGCC GAGGCCGGGC TGTTTTCAGG CTTTCTGCCG
GCCCTGCTGC TGTCGGGATT TGTTTTTGAC ATCAACAGCA TGCCCCCTGT CCTTCAGGCT
CTCACTCGGC TGTTGCCCGC CAGCTACTTC AACACCTGTT TGCGGACGAT TTTTCTGACA
GGCGATGTGT GGGGAATCTT CGGCCCGAGC CTGGCCTTTA TGGGGCTGCT GGCTGCGGTG
CTGCTGGGCC TGGTTTACAA GAAGCTTGTA AAAAGGCTGG ATGTATAA
|
|---|
| Protein sequence | MKTKLWLQQL LALIRKEFQQ IVRDPSSYLV AGVLPLIFLL LFGYGITLDA GVLRLAVLNE
SGGRHSLDLA ANFAHSPWFS TVEAGSMDEA ARFMRDSKVQ GVLVFRQDFD AALARGAAGE
IQVLVDGAEP NTAQYIQSYS QGLISRWQAT ALPGGAALEA PINLQPRYWY NPAAKSVQFL
VPGAITVIMT LIGTLLTSLV FAREWERGTM EAMFATPVSR MQLLLGKLIP YFCMGMFSMA
LCAGAAVLLF SVPFRGSWWV LLVISSVFML SALGQGLLIS VTLRGQLVAA EAGLFSGFLP
ALLLSGFVFD INSMPPVLQA LTRLLPASYF NTCLRTIFLT GDVWGIFGPS LAFMGLLAAV
LLGLVYKKLV KRLDV
|
|---|
| |