Gene Ddes_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1485 
Symbol 
ID7285183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1775248 
End bp1775655 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID643582296 
Productqueuosine biosynthesis protein QueD 
Protein accessionYP_002480065 
Protein GI220904753 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.959398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA AACTCTGGCG CCTTACTGTG CGCGACGATT TTTCCGCCGG ACATGCCCTG 
CGGCACTACG AAGGCAAATG TGAACGCATG CACGGTCACA ACTTTGCCGT AGAACTGACA 
GTTGAGGGTA ACCGTCTTGC CCCGCAGACA GAAATGCTGC TGGACTTCAA GATATTGAAA 
AAAGCCCTCA AAGCGGTACT GGATGCGCTG GATCACCGCC TGCTCAATGA AACCCCGCCT 
TTTGACCGCA TCAACCCTTC GTCAGAAAAT CTTGCGCGTC ATATCTGGCA GGGCATGGAA 
GCGCTGCTGG CGGAACACGA AGATCCGCAG GCCCGGCTGG TGCGTTTGCA CAGCGTTACC 
GTGTCGGAAA AAGGCGCGCA AAGCGCCACC TACCTGGAAA CGCGCTAA
 
Protein sequence
MSEKLWRLTV RDDFSAGHAL RHYEGKCERM HGHNFAVELT VEGNRLAPQT EMLLDFKILK 
KALKAVLDAL DHRLLNETPP FDRINPSSEN LARHIWQGME ALLAEHEDPQ ARLVRLHSVT 
VSEKGAQSAT YLETR