| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1475 |
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| Symbol | |
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| ID | 7285173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1764700 |
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| End bp | 1766115 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582286 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002480055 |
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| Protein GI | 220904743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA AGTCAAGCAT CATACCAGAA CATATACAGC TCGAATCACA CGACCCTGTC
TGGGAGTGGC ACACGACATC CGACAGGCTT TTCATGAGCG TAGGCGCCCT TGCCCAGCTA
CGCATGGACG GCAAACCGCC GCGCAGCATG AAAGATTATC TGGAGCACTG CCCCCTCGAA
AGCCTGGCTC CCCTTCTTGA ATCTATGGAA AAAGCGCTCA ACGGCTCCCA CGGGCCGCAC
CTTGAAGTGT TTTATCCTTT TGACAGTTTT CTGGTACGGT CTCAGATACT GGTCTTGCGG
CGCGACGTTT TCGGTCGCGG AACCCTGGTA ACAGGCTGCA ACGTGGCTAT GGACAGACAA
AGGCTTGCAC CCACTGCTGC CGCCGCCCCC GTGCCGGCAC CCCAGCCCCC GCCCCGAAGC
CTGGCCGAAG CCGCCGTTCC TTCCACGGCC CGCAGCGACG CCAGCCGCCT CATGCTGGCC
CTCAACGCCG CCAGCGATGG CCTGTGGGAC TGGGACCCCA GCACCAATGC CATTTATTTC
AGTCCCCGCT ACCTCGACAT GCTTGGCTAC ACCAGCGAAG AATTCCCCCC CCTGTCCACA
TCATGGACCA GCAAGGTACA CCCCGACGAT TACGACAACA TCGTTCCCAT GCAGATTGAA
TTCATCAACA ACCCCAAAAT GGGCGACAGC TTTGAATGCA CCTACCGGAT GCAGCGCGGC
GACGGCACCT GGGCATGGAT TCTCAGCCGG GGCTATGTGA CTCACCGCGA CGCAAGCGGC
AAGGCCATCC GCGTTGTGGG CCTGCACACA GACGTCAGCG CGAGCCAGGG CGACAGGGCA
CGGCTTGAAG AGCTGGTGCG TAACGACGCC CTTACCGGGC TGCGCAGCCG CACCTATTAT
GGAATGACTG TCGACAAGCT GGAACAGCAG CAGATGCGGC CCGTCAGCAT CATCATCGCC
GACATGGACG GACTCAAAAT GGTCAACGAC CATGTAGGCC ATACCGAAGG CAGCGAAATG
CTCTGCCAGG CAGCCATCAT ACTGCGCGGC AGTCTCAATG CCACCGACTG TATCGCCCGC
ATGGGCGGCG ATGAATTTGC CGCCATTGTG CCGGGTTGCG CCAAGGAAGA CCTTGAGGCG
CTCATCCAGC GGGTCAGAGA CGCTTTTGAT GCCTATAATG CCGACCCGGA CCATGTGCCG
ACACACATGT CTGTGGGCGG AGCATGCGCT GACGACATGA ACACCACCCT GGCCCAGGCC
CTGTCGGAGG CGGATCGCAA CATGCTGGCC GTCAAGCACG AAAGCAGCCC AAAGTGGCGC
CTGCGCATAA AAAACTGGAT AGAAAACCGG ACCGGCAAAA CAATTCAGCT TGAAGACAGC
CGCTACAGGA TGTCCCCCAC GCACGACGAC TCTTGA
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| Protein sequence | MLNKSSIIPE HIQLESHDPV WEWHTTSDRL FMSVGALAQL RMDGKPPRSM KDYLEHCPLE
SLAPLLESME KALNGSHGPH LEVFYPFDSF LVRSQILVLR RDVFGRGTLV TGCNVAMDRQ
RLAPTAAAAP VPAPQPPPRS LAEAAVPSTA RSDASRLMLA LNAASDGLWD WDPSTNAIYF
SPRYLDMLGY TSEEFPPLST SWTSKVHPDD YDNIVPMQIE FINNPKMGDS FECTYRMQRG
DGTWAWILSR GYVTHRDASG KAIRVVGLHT DVSASQGDRA RLEELVRNDA LTGLRSRTYY
GMTVDKLEQQ QMRPVSIIIA DMDGLKMVND HVGHTEGSEM LCQAAIILRG SLNATDCIAR
MGGDEFAAIV PGCAKEDLEA LIQRVRDAFD AYNADPDHVP THMSVGGACA DDMNTTLAQA
LSEADRNMLA VKHESSPKWR LRIKNWIENR TGKTIQLEDS RYRMSPTHDD S
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