Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1461 |
Symbol | |
ID | 7285159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1748726 |
End bp | 1749403 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643582272 |
Product | TonB family protein |
Protein accession | YP_002480041 |
Protein GI | 220904729 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAG CCGCTCGTGG CACAACCCTG TTTTTTTCCC TGGGTATGCA CTCTTTGCTG CTGGGCGGTT TGTTGTTTCT GGCTAGAGAA ACGCCCAATA CCACGGAAAG AGTGTACCGT GTAGCGCTTG CCGAATTTGC CCCGACCCCC AGCCTGCCAC CACCACAGGC GGCAGCTGAA CCGCCTGCGC CGCCTCCGCC TCCAGCACCA AAAAAGCAGG AAGTTCAGCC TCAAAAGCCT GTGGAACCAA AACCGGATGT AAAAAAAATC AGCCCCAAAA AGAACAATGT CCCCCTGCCC AAAGAGCAGG CGGCCCCTCC ACGGCCGGAG GCACTGACAC CTCCTGCGCC CGCCGGGCCG CAACCCCGCA CCGTGGGTGG TTTCAGTGCG TATGAGAGCG ACTCGCTGGA CCAACGCCCG AGTATTACCC GGCGTGTTGT TCCCGAATAC CCCATCAAAG CCCGACGCAT GAATGTCCAG GGTTCCGTCA AGGTGCGTCT TGTGGTGGAT TCCTCCGGCC AGCCCCGTAA CTGCGAAATT ATCAGCGCAA CACCGGATGG CTATTTTGAA GAGGCTGCGC TCAAGGCAGC CCAAAGGATG CGCTTTGCGC CCGGCAAACT CAAAGGGCAA CCGGTAAACA CTCTGGTAGT GATTCCCTTT GCGTTCAGCC TGCGGTAG
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Protein sequence | MKVAARGTTL FFSLGMHSLL LGGLLFLARE TPNTTERVYR VALAEFAPTP SLPPPQAAAE PPAPPPPPAP KKQEVQPQKP VEPKPDVKKI SPKKNNVPLP KEQAAPPRPE ALTPPAPAGP QPRTVGGFSA YESDSLDQRP SITRRVVPEY PIKARRMNVQ GSVKVRLVVD SSGQPRNCEI ISATPDGYFE EAALKAAQRM RFAPGKLKGQ PVNTLVVIPF AFSLR
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