Gene Ddes_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1459 
Symbol 
ID7285157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1747561 
End bp1748250 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID643582270 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002480039 
Protein GI220904727 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCCA TGATTGAGGC TGTGCTGCAG GCTACGCTTA TTTCCAAATG TGTGCTGGTA 
CTGCTGTTGT TTATGTCTGT GTCCAGTTGG GCGTACATGT GCGGAAAGTG GTTGACCTTG
CGCTCTGCCC AGCGCCGTAC CCAAAGAGGG CTTGTGGCCT TTGACGATGC CGGAGAGTTG
TGCCAGGCCC TGCCTGTAAT GGAGGCTGAC CGCCAGTCGC CCCTGTACGG CATCACCCGC
CGCGCTGTGC GCGAGTACAA CCGCCTCACC CGCACGGGAG ATACCGAGCG CCTGCTTAAT
GACAACGTGC GCCGTGCCCT GCATTTCGCC ATTGCCGAAG AAGTCGCACG GCTCAAGTCC
TCTCTGGCCC TGCTCGCCAC CGCCGCCAAT ACGGCCCCGT TCATCGGCCT GTTCGGCACA
GTGTGGGGAA TCATGCATTC CTTTACTGCC ATTGCCCAGA TGAAGAGCGT GTCGCTGGCA
ACAGTGGCCC CCGGCATAGC TGAAGCGCTT ATTGCCACGG CAGTGGGCCT GTTTGTGGCT
ATTCCCGCCG TGTGCGGCTA CAACGTGTTC AGGGCAAAGC TGGTATATAT TGAAGGCGTG
TGCATCAACT ACGCCGGTCA GCTGCTCAAC CGCCTGCAAC ATGAAGCGCC GGAATACAGC
AAAGGCATCA ACTTTGCCGG GGAGCGCTGA
 
Protein sequence
MNSMIEAVLQ ATLISKCVLV LLLFMSVSSW AYMCGKWLTL RSAQRRTQRG LVAFDDAGEL 
CQALPVMEAD RQSPLYGITR RAVREYNRLT RTGDTERLLN DNVRRALHFA IAEEVARLKS
SLALLATAAN TAPFIGLFGT VWGIMHSFTA IAQMKSVSLA TVAPGIAEAL IATAVGLFVA
IPAVCGYNVF RAKLVYIEGV CINYAGQLLN RLQHEAPEYS KGINFAGER