Gene Ddes_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1458 
Symbol 
ID7285155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1745959 
End bp1746708 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID643582268 
ProductDeoxyribonuclease I 
Protein accessionYP_002480038 
Protein GI220904726 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.118773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAC TGCTTTTTTC CAGCGTATTT TTTTTCAACG CCTGCTTGGT ACTGGCTGCC 
GGAAACCTCA GTAATGAAAG CTTTTCCGCG GCCAAAAAAA TGCTGGCAAG CCAAGTGTAT 
CATGACCATT CCGTTACACT GTACTGTGGT GCGGTCTATG ATTCCGGCGG CGAAATTACC 
CTGCCGGAAG GGTTTTCAGT TGCTGCACAT GCTGCACGGG CCGCAAGACT GGAATGGGAG 
CACGTCCTGC CTGCAGAAAG TATGGGCCGC TTTTTTCAGG AATGGAGACA AGGGCATCCT 
GCGTGCGTCA AAGGTGCCAA GCAGTACAGG GGCCGACGCT GTGCGGAAAA AGTCAACAGC 
CATTACCGCC TCATGCAGGC TGATATGTAT AACCTGTACC CGTCCATAGG TGCGGTTAAT 
GCCCTGCGTT CCAACTTTAT CCATGCCATG CTGCCGGAAG CCGTGTCGAG CTTTGGGCAA 
TGCGCCATGA AAGTGGCAAG GAACAGGGCA GAACCGCCGG AGCGCGCGCG TGGTCAGATA 
GCACGTACCT ATTTTTATAT GGCAGAGGCC TATTCTTCAT CCTACAGGAT GAGCCACAGG 
CAACGAAAGC TTATGCGGGC CTGGAACAGC CGGTATCCGG TGGATGCGTG GGAGTGCGCC 
CGGGCCGGGC GTATCGAGAG GCTTCAGGGC AACGAAAACA GGTTTGTCAA ACAGGCCTGT 
CTGGAGGCCG GACTGTGGGC TGGGGACTGA
 
Protein sequence
MRILLFSSVF FFNACLVLAA GNLSNESFSA AKKMLASQVY HDHSVTLYCG AVYDSGGEIT 
LPEGFSVAAH AARAARLEWE HVLPAESMGR FFQEWRQGHP ACVKGAKQYR GRRCAEKVNS 
HYRLMQADMY NLYPSIGAVN ALRSNFIHAM LPEAVSSFGQ CAMKVARNRA EPPERARGQI 
ARTYFYMAEA YSSSYRMSHR QRKLMRAWNS RYPVDAWECA RAGRIERLQG NENRFVKQAC 
LEAGLWAGD