Gene Ddes_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1446 
Symbol 
ID7285142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1733906 
End bp1734340 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID643582255 
Productribose 5-phosphate isomerase B 
Protein accessionYP_002480026 
Protein GI220904714 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.396381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCA TCCATCTGGC ATCGGACCAT GCTGGCATCG ATCTTAAAAC CACACTGGCC 
GAGCATTTGG GAAAAAAAGG CATCAACGTC GTAAACCACG GCACTGATTC CAGAGAAAGC 
TGCGACTATC CCGTCCTGGC GCACAAGCTT TGCGCCGCTG TGGAAGCGTC CGGCGAACTG 
GGCATTCTTA TTTGCGGCAC GGGCATCGGC GTGTCCATAG CCGCCAACCG CCACTCCGGC 
ATCCGCGCCG CTCTTTGCAC CACGGAACTG CACGCCCGCT TTTCGCGCCT TCACAACAAT 
GCCAATGTGC TTTGCCTCGG CGCGCGCGTC ACCGGTGTGG AGCTGGCGCA GGCCATAGTG 
GATGCTTTTC TGGAAGCCCC TTTTGAAGGC GGCCGCCACC AGCGTCGCCT GGATATGCTT 
AACCTCCCCG CATAA
 
Protein sequence
MQSIHLASDH AGIDLKTTLA EHLGKKGINV VNHGTDSRES CDYPVLAHKL CAAVEASGEL 
GILICGTGIG VSIAANRHSG IRAALCTTEL HARFSRLHNN ANVLCLGARV TGVELAQAIV 
DAFLEAPFEG GRHQRRLDML NLPA