Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1443 |
Symbol | |
ID | 7285139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1729654 |
End bp | 1730955 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643582252 |
Product | putative RNA polymerase, sigma 70 family subunit |
Protein accession | YP_002480023 |
Protein GI | 220904711 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000239959 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA ATAGCAAGAT AGCCCCGAGC AAAACCAAGG GCGCCGCAGC AGCGGAAAAA AGCAGAAAAA CCACGCTTCC GGTGGAGGTT GTCGGGCCTG AAGATGCCCC CAGGCAGCCC TCTGCGGCTG CCGGAAAAAC ACGAACCCGC GTTGCCGCAG ACACTGCCGC CAAAACATCC GCCGGGAACG CCGGCAAAAG CCGAAAAAAA GAAACGTCTT CAGCTCTTGA GCCCGACGAT GGCAGCCGCA GCTCCGGCAC GGTGCTGGAT GTGGACGAAC TTGAACATGA GCGCGATACG GACGAGCTTG ATATCGAATC GCCCGACAGC GAAGAAGAAC TGCTCGACTC CGACATGGAC GAAGACGATG AGCCGCGCCT GACAGATGAA GATGAACAGG ACCGCAGCGT TCCCGCGCCC TCTTCTTCAC GGGTGCCTGC CGTGGGTACT CGCGACAGCC TGCACCTGTA TCTTCGCGAA GTAAGCCGCT TCCCCATGCT TAAACCCGAA GAGGAGCATG AACTGGCTGT GCGCGTGCGC GATCATAATG ATGCGGACGC CGCCTTTCGC CTGGTTTCAT CCCACCTGCG GCTGGTCGTG CGCATCGCCA TGGATTTTCA GCGCCGCTGG ATGCAGAATG TGCTTGACCT TGTGCAAGAA GGAAATGTGG GCCTCATGCG CGCGGTCAAC AAGTTTGACC CCGACAAGGG CATCAAGTTT TCCTATTATG CCTCGTTCTG GATCAAAGCC TATATTCTCA AGTTCATCAT GGACAACTGG CGCATGGTCA AGATCGGCAC GACCCAGGTG CAGCGCAAGC TGTTCTACAA CCTGAACAGA GAACGCCAGA AGCTCATCAT GCAGGGCTAC GACCCGGATG CCGCCATGCT TTCGGAACGC CTGGGCGTAA CCGAAGAGCA GATAAATGAA ATGGACCAGC GCCTTGCCTC TACAGACATG TCGCTTAACG CCCAGGTGGG CGAAGATTCT GGCGGCGCCA CCCGCATGGA CTTTCTGCCA GCCCTGGGAC CAGGGATCGA AGACAGTCTG GCATCTACGG AAATAGCGGG AATTGTGCGC TCAAAGCTGA AAACCATCAT GCCGAAGCTC AACGAGAAAG AACAGTATAT CCTGCACAAC AGGCTGCTTT CTGACGAGCC GATCACCTTG CGTGAGATAG GCGAACGGTA TAACATCACA AGAGAAAGAG TGCGCCAGCT TGAGGCGCGC CTGGTGGAAA AAATTGGCCA GCACATGAAA AATGACATCG AAGACTTCTC CGATCACTGG ATTCAATCCT AG
|
Protein sequence | MKKNSKIAPS KTKGAAAAEK SRKTTLPVEV VGPEDAPRQP SAAAGKTRTR VAADTAAKTS AGNAGKSRKK ETSSALEPDD GSRSSGTVLD VDELEHERDT DELDIESPDS EEELLDSDMD EDDEPRLTDE DEQDRSVPAP SSSRVPAVGT RDSLHLYLRE VSRFPMLKPE EEHELAVRVR DHNDADAAFR LVSSHLRLVV RIAMDFQRRW MQNVLDLVQE GNVGLMRAVN KFDPDKGIKF SYYASFWIKA YILKFIMDNW RMVKIGTTQV QRKLFYNLNR ERQKLIMQGY DPDAAMLSER LGVTEEQINE MDQRLASTDM SLNAQVGEDS GGATRMDFLP ALGPGIEDSL ASTEIAGIVR SKLKTIMPKL NEKEQYILHN RLLSDEPITL REIGERYNIT RERVRQLEAR LVEKIGQHMK NDIEDFSDHW IQS
|
| |