| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1429 |
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| Symbol | |
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| ID | 7285125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1710238 |
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| End bp | 1712736 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582238 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_002480009 |
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| Protein GI | 220904697 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.143745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCA AGAGTGTTCA AAGCGTCATT CGTGATGCGC TTATGGAAGC GCACCGGCGC
CGCCATGATA TGTTGACTGT CGAGCACGTG CTTTATGCGC TCACAAACAG CATGCGCGGC
CGTATCCTGC TTGAGGGCAG CGGGGCCAGC GTGGCCGTGC TGCGCGAGCA GCTCGAGGAC
TTTTTTAATC GTGAACTGGA AGTGGTTCCT CTTGCGGGCA AGCACGAAGT GGCCCAGACA
GAAGGTGTGC AGCGCGTGCT TGAGCGCGCC CTTGGGCATA TCCGTGCTGC CGGACGTGAT
ACCGTGGAAC TGGGCGATCT GCTCATTTCC ATTATGGATG AAGAGGAAAG CTATGCCCAC
TATTACCTGC GCAAGCAGGG GGTGGAACGT CTGGACGTGC TCACGTTTGT GTCGCACGGC
ATGGACGAGG GCGGTGGCTC CCGCGGGGTG GACCAGGGCG GCGAAGGCGA AGAAAAAGAC
GCCAAGGCCG ACCCCCTGGC CCAGTATGCC GTTGACCTCA CGGCCCGCGC CCGCGAAGGC
AAGATAGACC CGCTGGTAGG GCGTGAAAAT GAGCTTGACC GCGCGGTAGA GGTTTTGTGC
CGCCGCCGCA AGAATAACCC TCTTTTTGTG GGCGACCCCG GCGTGGGAAA AACCGCTCTG
GCCGAAGGTC TGGCTTTGCG CATAGTTGAA GACGACGTGC CGGAGATGTT CAGCAATGCC
AAACTGTTCG CCCTGGATAT GGGCCTTCTG CTGGCAGGTA CGCGCTATCG GGGAGATTTT
GAAAGCCGCC TCAAGGCAGT GGTGCAGCGT CTGAAGGAAC TGCCTGAAGC CATTCTGTTC
ATTGATGAAA TACATACCAT CGTAGGTGCC GGTTCCACGT CCGGCGGCTC CATGGATGCT
TCCAACCTGC TCAAACCCGT GCTTGCCAGT GGCGAACTGC GCTGCATCGG CTCCACCACA
TACGAAGAGT TTCGCAACCA TTTTGAAAAA GACCGCGCCC TGGCCCGGCG TTTTCAGCGT
ATCGACCTGA CCGAGCCAAG CCCGGAGGAA TGTCTCGCCA TCCTTCAAGG ATTGGAAAAA
CGCTATGCGG ATTTCCACAA GGTCCGGTAC AGCACGGCTG CTGTCAAGGC GATGGTGGAC
CTGACGGCCC GCCACGTGCG TGACCGTCTG CTGCCCGACA AGGCCATTGA CGTTATGGAC
GAATCCGGGG CGGCTGTGCG CCTGGGCCGT GGGGTGCAGG GGGCCAGGGC TTCATCCGGC
AAAAAAGCCG TTGCAAGCGG GAAAAAGCTG CCGCCCCTGG TAAGCGTGGG GGATGTGGAG
CGTATTGTGG CCCGTATGGC GGGCATTCCC GTGCGTACTG TCTCCGGCAC GGAACGCAAC
CGGCTGGCCT CGCTTGAGAA AGATCTCAAG GAGCTGGTGT TCGGGCAGGA TGCGGCTATC
GAGCTTACTG TACGGGCCAT CTTGCGCGCC CGCGCCGGGC TTGGTCAGGA GCAGCGCCCG
GCCGGAGCGT TTTTATTCTA CGGCCCCACG GGTGTTGGTA AAACAGAGGT GGCCCGCAGC
CTGGCAAAAC TCATGGGCGT GGAGTTTCTG CGTTATGACA TGAGCGAATA TATGGAAAAG
CACGCCGTGT CGCGTCTTAT CGGCGCGCCT CCCGGCTATG TGGGCTTTGA TCAGGGCGGC
CTGCTGACCG AGGCCGTGCG CAAGGCCCCG TATTCCGTGG TATTGCTGGA CGAGGTGGAA
AAAGCCCACC CCGACATTTT CAATGTGCTC CTTCAGGTAA TGGATTATGC CACGCTGACG
GATAATACGG GCCGCAAGAC GGACTTTTCG CATGTTGTCC TGATCATGAC CTCCAATGCC
GGAGCCTTTG ACATGTCCCG CCCGGCCATG GGCTTTGGCG GGGCTACACG GCAGGATGCG
GCTCATAAGG GACTCAAGGC TGTGGAAAAT ACCTTCAGCC CCGAGTTCCG CAACAGGCTT
GATGCGCTTG TGCCGTTCGG TAGCCTGACT GAAGATATGA TGCTGCGCAT TGTGGACAAG
TTTATGGCTG AAATTATCGA AAGCCTCGAG CAGCGACAGG TGAGCCTTGA GCTTGGGCAG
AAGGCCCGGC AATGGCTGGC CCGCAAGGGC TTTGACCCCA CCATGGGGGC GCGTCCCCTG
CGGCGTCTGC TGCGTACCGA GCTGGAAGAC AGGCTGGCGC ACGAATTGCT GTTCGGTTCG
CTGGCCAAGG GCGGAACCGC CCGGCTTGAC CTCGTGGATG ATGCCCTTGT GCTGGAATCC
GCTGCCGCCA GGTCTTCGCG GGCTGCTGCG TCCGGTAAAC AGATGGTGAA GGGCAAGCCC
AGGACGTCCG GCCCGGCAGA TGCAAAGACC GCCAGTGCGG GCGGCAAGAA AAAAGCCTCT
GGCAAGGGCA GAACGCCGGG AACTGCAGCA AGTGGTTCTG GTTCCGGGGC TACGGTTGCC
AAGGGCGAGC CTGTGAAGAA ATCCGGCAAG GCAGACTAG
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| Protein sequence | MLSKSVQSVI RDALMEAHRR RHDMLTVEHV LYALTNSMRG RILLEGSGAS VAVLREQLED
FFNRELEVVP LAGKHEVAQT EGVQRVLERA LGHIRAAGRD TVELGDLLIS IMDEEESYAH
YYLRKQGVER LDVLTFVSHG MDEGGGSRGV DQGGEGEEKD AKADPLAQYA VDLTARAREG
KIDPLVGREN ELDRAVEVLC RRRKNNPLFV GDPGVGKTAL AEGLALRIVE DDVPEMFSNA
KLFALDMGLL LAGTRYRGDF ESRLKAVVQR LKELPEAILF IDEIHTIVGA GSTSGGSMDA
SNLLKPVLAS GELRCIGSTT YEEFRNHFEK DRALARRFQR IDLTEPSPEE CLAILQGLEK
RYADFHKVRY STAAVKAMVD LTARHVRDRL LPDKAIDVMD ESGAAVRLGR GVQGARASSG
KKAVASGKKL PPLVSVGDVE RIVARMAGIP VRTVSGTERN RLASLEKDLK ELVFGQDAAI
ELTVRAILRA RAGLGQEQRP AGAFLFYGPT GVGKTEVARS LAKLMGVEFL RYDMSEYMEK
HAVSRLIGAP PGYVGFDQGG LLTEAVRKAP YSVVLLDEVE KAHPDIFNVL LQVMDYATLT
DNTGRKTDFS HVVLIMTSNA GAFDMSRPAM GFGGATRQDA AHKGLKAVEN TFSPEFRNRL
DALVPFGSLT EDMMLRIVDK FMAEIIESLE QRQVSLELGQ KARQWLARKG FDPTMGARPL
RRLLRTELED RLAHELLFGS LAKGGTARLD LVDDALVLES AAARSSRAAA SGKQMVKGKP
RTSGPADAKT ASAGGKKKAS GKGRTPGTAA SGSGSGATVA KGEPVKKSGK AD
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