Gene Ddes_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1421 
Symbol 
ID7285117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1700071 
End bp1701159 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID643582230 
ProductPSP1 domain protein 
Protein accessionYP_002480001 
Protein GI220904689 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.703416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTTTA TGCCCATATA CGGCCTGCGT TTTCGCGCGT TGGGCCAGAC AAGCTATTAC 
AGCGGCCCTC CGGGACTCAG CCCGGGTGTG CACGTGCTTA TCGAAGCCGA ACAGGGCTAC 
GCTCTGGCAC AGGTGGTTTC CGGCCCTGCG CAGCATTTGC CCAAGCAGGA AAGTGAACCT 
TTGCCCCATA TCCTGCGGCT GGCAAGCCCG GAAGATGTGC GGCGTGGCGA GGCCAACGAG 
CAGCTGAGCC GCGAGGCACA GGCATTCTGC CGCCAGTGCA TACGTCAGCG CAACCTGGAC 
ATGAAGCTTG TGGATGTGGA AGTTTTTTTT GACCGCAGCA AGCTGATTTT TTATTTTACC 
GCCCCTTCGC GCATTGATTT TCGCGATCTT GTCAAAGATC TCGTGCGCGA ATACCGCGCC 
CGTATCGAAC TGCGCCAGAT TGGCGTGCGT CATGAAACGC AGATGGTCGG CGCTGTGGGC 
AACTGTGGCA TGGTGTGCTG CTGCCGCCGT TATCTGCGCA AATTTGCTCC TGTGACTATA 
CGGATGGCCA AGGAGCAGAA CCTGTTTCTT AATCCTGCCA AAATTTCCGG CATTTGCGGG 
CGGCTTTTGT GTTGCCTTTC GTATGAACAG GAAAATTACG ACCATTTTCA CCGGAACTGC 
CCCCGCCTTG GCAAGAAGTA TCAGACCGAC AAGGGCGGCA TGAAGGTCCT GCGGGCCAAC 
ATGTTTCGTA ATTCCCTGGC TGTGCTCACC GAAGCCAATG AGGAACTGGA ACTGACGCTC 
GAAGAATGGC AGGCGCTTTC ACCGCACCGG CCCGAAGCGC CGCCGTCGCC GCAAGGCCAG 
AACAAGCAGC CACCCAAGCA GCTTGTCGGA GACGGCTTGC TGGTGGTTTC GGCCACGCCA 
GACACGCTGG AGCATCTTGA CTTTATGGAT GACCTGTTTT CTCAGGACGC CGCCGGACAG 
CAGGATGCCC ACCGGCCGGA GCATGCTGCC GGCAGCGGTC ATGACGGGCC GGGAACCGAT 
GGGCATGGCG ATGCGGCAAA GCCGCGCCGC AAGCGCCGCC GTAAAACACA GAAAAACGAA 
AATCAATAA
 
Protein sequence
MTFMPIYGLR FRALGQTSYY SGPPGLSPGV HVLIEAEQGY ALAQVVSGPA QHLPKQESEP 
LPHILRLASP EDVRRGEANE QLSREAQAFC RQCIRQRNLD MKLVDVEVFF DRSKLIFYFT 
APSRIDFRDL VKDLVREYRA RIELRQIGVR HETQMVGAVG NCGMVCCCRR YLRKFAPVTI 
RMAKEQNLFL NPAKISGICG RLLCCLSYEQ ENYDHFHRNC PRLGKKYQTD KGGMKVLRAN 
MFRNSLAVLT EANEELELTL EEWQALSPHR PEAPPSPQGQ NKQPPKQLVG DGLLVVSATP 
DTLEHLDFMD DLFSQDAAGQ QDAHRPEHAA GSGHDGPGTD GHGDAAKPRR KRRRKTQKNE 
NQ