Gene Ddes_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1408 
Symbol 
ID7285103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1682762 
End bp1683619 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content56% 
IMG OID643582216 
ProductTPR repeat-containing protein 
Protein accessionYP_002479988 
Protein GI220904676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.320604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCC AAAAGACCAC GGAAAACACG CGCCCTGCGG CGCACGCGCA AACCGCTACG 
GCCCCCAAGG CCGAGGTGCG CGGCGTGTTT TCGACCCAGG AGGTCCGCCG GGTAGGTACA 
GGCACCACCA CCCGAAAAAC TGTGCAAAAA AACTTCTGGT TTATTGAGCA GCACGGCAAT 
GTCATCGAAT GCCAGCCCCT CAATACCAAC TATGTGCCCA GCGGCCCCAA GCGTAAAATT 
ACCATGGACG AGCTTATCGC CAAGTTCGCC CCGGAGCCGG AGTTTTATCT CAACTCTGTC 
TATCCAAAGA TGCAGGAAAT GCAGCGGGCT GTTGACAACG GCGATGAGCA TCGTGAAAAA 
GGCGAAAATT TTACTGCGGA ATTTGAATAC TCTCGTGCTC TCGGCATTGA TGAAGACAAC 
GTACGCGCCA ACTTCGGCAT CGGCCTCACA TACCTTGAGC GCGGCGACGC CAACAAGGCG 
CAGAACATTT TTGAACGCCT GGTCAAGCTT GATGGAGCCT TTGAGCCGGA ACACAAGCAC 
CTGTTCAATG ATTTCGGCAT CAGCCTGCGC AAAAACAAGA TGCTGCAGCA GTCGCTGGAG 
TATTACCAGC GTGCCCTGGA GTTGAGCCGG AATGATGAAA ACCTTTATAT GAACCTTGCG 
CGGGTGCTGC TGGAAACCAA AGACCTCAGC GGTTGTGTGG ACAACCTGCT CAAGGCCCTT 
GAACTGGCCC CCAGGCATGA GCCTTCACTC AAATTTCTGG CCTGGCTCAT TCAAAACAAA 
CTTGTACCCG CCGACAAGGT GGACGGAGTG CGCGCCGCCC TGCAGGCCGT AACCCAGAAC 
GCCGGCAGCG CCTCCTGA
 
Protein sequence
MSGQKTTENT RPAAHAQTAT APKAEVRGVF STQEVRRVGT GTTTRKTVQK NFWFIEQHGN 
VIECQPLNTN YVPSGPKRKI TMDELIAKFA PEPEFYLNSV YPKMQEMQRA VDNGDEHREK 
GENFTAEFEY SRALGIDEDN VRANFGIGLT YLERGDANKA QNIFERLVKL DGAFEPEHKH 
LFNDFGISLR KNKMLQQSLE YYQRALELSR NDENLYMNLA RVLLETKDLS GCVDNLLKAL 
ELAPRHEPSL KFLAWLIQNK LVPADKVDGV RAALQAVTQN AGSAS