| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1402 |
|---|
| Symbol | |
|---|
| ID | 7285097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1679002 |
|---|
| End bp | 1679583 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643582210 |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_002479982 |
|---|
| Protein GI | 220904670 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCTGATACT GGCCGGTGAT TATGTAGAAG ATTATGAAGT GATGGTGCCT
TTTCAGATGC TACTCATGCT CGGCTATGAC GTGCATGCCG TATGCCCCGG CAAAAAATCT
GGCGATGTTG TGCGCACCGC CATTCATGAC TTTGAGGGCG ACCAGACCTA CTCGGAAAAG
CGCGGCCATA ATTTTGTCAT CAATTTTGAC TTCGACAAGG TAAACACTGC CGACTATGTC
GGGCTGGTGG TTCCCGGCGG GCGTGCACCG GAATACCTGC GCCTGAATCC GCGTATTCTT
GAAATTGTAC GCGAGTTCAA TGCGGCCGGA AAGCCCATTG CCGCGGTCTG CCATGGCCCG
CAGATTCTTG TTTCTGCCGG TGTTCTGAAA AACCGCACCT GCACTGCCTA TCCCGCAGTA
AAGCCTGATG TGGTAGATGC CGGAGCCATC TGGGCCGAAT TTAACGAGAC CTTCACCAAC
GCCGTGGTGG AGGGCAACCT TGTGACTGCT CCGGCCTGGC CTGCGCATCC TGCGTGGATT
GCGGCCTTTG TCAAACTGCT CGGCGCAAAG ATCAGCATTT AG
|
|---|
| Protein sequence | MKKILILAGD YVEDYEVMVP FQMLLMLGYD VHAVCPGKKS GDVVRTAIHD FEGDQTYSEK
RGHNFVINFD FDKVNTADYV GLVVPGGRAP EYLRLNPRIL EIVREFNAAG KPIAAVCHGP
QILVSAGVLK NRTCTAYPAV KPDVVDAGAI WAEFNETFTN AVVEGNLVTA PAWPAHPAWI
AAFVKLLGAK ISI
|
|---|
| |