Gene Ddes_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1391 
Symbol 
ID7285086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1664579 
End bp1666045 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content59% 
IMG OID643582199 
ProductrfaE bifunctional protein 
Protein accessionYP_002479971 
Protein GI220904659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTG ATACGGTGCA TGTGCTGGTA GTGGGCGACG TAATGCTTGA CCGCTACATT 
GCCGGGAGTG TGGGGCGCAT ATCGCCTGAA GCCCCGGTGC CTGTACTTGG CGTGAACAAA
CGATGGTTCG CGCCGGGCGG CGCGGCCAAT GTGGCCCGCA ATCTGGTGAA CCTTGGAGCG
CAGGCCACCC TTGTGGGCCT TTCCGGCATT GATGAAGCCG GCGACGATCT GTGTCGGAGC
CTGGAGCAGG CCGGCATTGA GCACCGCCTG ATATCTTCCG GAGCGCGCAG CACCACATGC
AAGACCAGAG TGCTCGCCCA GGGGCAGCAG TTGCTGCGGC TGGATGAAGA GCGCTGCATG
CACCCGGACG CGGATGAGCT TGATGCCTTG CGCCAGGCGG TGTTTGATAC GCTGCCTGAT
TGCCGTGCAG TGATCCTTTC TGATTACGGC AAGGGTGTTT TGCTGGAAAA CGAGCAGGGT
GAAAGCCTGT GCCGCGCTAT TATCGACGAA GCCCGCCGCC TGGGTATTGC CGTGCTTGTG
GATCCCAAGG GAACGCAGTG GGGCCGCTAT GCGGGTGCGC ATTGCGTAAC GCCCAACAGG
CAGGAATTTG CTCTGGCCTG TGGCAGGGAC GAACATGTGC CGCTGGACAG GGCGCTGAGG
GCAGAACTGG CAGACCGGCT GCGGAAACGC CATGCCATTG AAAGAGTGCT GCTGACCCGT
GGGGCCAAGG GAATGGCCCT GTTCGGCCCG GATGCACCTC CACGTTATAT ACGAGCCGCC
ATGCGCGAAG TTGCGGATGT TTCCGGAGCG GGCGATACTG TGATTGCCAC TCTGGGGGCC
TGCATCGGCA GCGGCTTGTC CTGGGAAGAA AGCATGGATG CGGCCAATGC CGCGGCCGGC
GTTGCTGTGG GAAAAATGGG TACGGCTCCT GTAAGTATTA CCGAATTGCG TCAGGCGCTG
CGTCAGGGCG CGGATAATCC CAAGCTTTAT GCCTTGCCAG AGCTTCTTGA AAAGGTGGAA
GACTGGCGGC GAAAAAATGA AAGCATAGTC TTCACCAACG GATGTTTTGA CTTACTGCAT
CCGGGTCATA TTTCTCTTTT ACGCCAAAGT GCCGCTCAGG GAACCCACCT TGTGGTGGGG
CTTAATTCCG ATGCCTCGGT ACGCCGTCTC AAGGGGCCAA GCCGCCCGGT ACAAAACGAG
CAAAGCCGCG CGTTGCTTTT GTCCGCTCTG CACGGAGTGG ACGCAGTCGT GTTTTTTGAC
GAAGACACAC CGCTGAATCT TGTCACCGCC CTGCGTCCTG ATGTACTCGT CAAAGGCAGT
GACTATACGG TGGAAACCGT AGTGGGGGCG GATGTGGTGC TGGCTTCGGG CGGCCGCGTC
TATCTGGCCG ATCTTGTGCA GGGGTGCAGT ACCACCGGGA TTGTGCGCAA AATTGACGCT
TCCGGCGGGA ACAGCTCCTC ACGTTGA
 
Protein sequence
MNFDTVHVLV VGDVMLDRYI AGSVGRISPE APVPVLGVNK RWFAPGGAAN VARNLVNLGA 
QATLVGLSGI DEAGDDLCRS LEQAGIEHRL ISSGARSTTC KTRVLAQGQQ LLRLDEERCM
HPDADELDAL RQAVFDTLPD CRAVILSDYG KGVLLENEQG ESLCRAIIDE ARRLGIAVLV
DPKGTQWGRY AGAHCVTPNR QEFALACGRD EHVPLDRALR AELADRLRKR HAIERVLLTR
GAKGMALFGP DAPPRYIRAA MREVADVSGA GDTVIATLGA CIGSGLSWEE SMDAANAAAG
VAVGKMGTAP VSITELRQAL RQGADNPKLY ALPELLEKVE DWRRKNESIV FTNGCFDLLH
PGHISLLRQS AAQGTHLVVG LNSDASVRRL KGPSRPVQNE QSRALLLSAL HGVDAVVFFD
EDTPLNLVTA LRPDVLVKGS DYTVETVVGA DVVLASGGRV YLADLVQGCS TTGIVRKIDA
SGGNSSSR