Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1355 |
Symbol | |
ID | 7285049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1629270 |
End bp | 1629866 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643582162 |
Product | microcompartments protein |
Protein accession | YP_002479935 |
Protein GI | 220904623 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.431976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGTATG CAGGTGAGGA GGCCCTCGGC CTCATTGAAA CGCTGGGGAT GGTGCCTGCC ATTTATGGGG CGGACAACAT GCTCAAAGCC GCAGATGTAG AACTGATCGC TTACGAAAAC GTAGGTTCTA CTCTTGTAAC CATTATGGTA AAGGGCGATG TGGCAGCCGT GCAGGCCTCT GTGGCCGCCG GGGCCGCAGC TGCAGCCACC ATAGGCAAGC TCACGGCGCA AAATGTCATG CCGCGCCCGG TTCGCGGGGT TGGCGGCATC GCCATGGCCC ACGTTGTGGA CTCCATACCC GAGGGTGACC CCGGCCTACG TTCGCTGGGC ATGATTGAAA CCTTCGGGAT CGTCTATCTT ATGGAAGCGG CTGACGCCAT GATAAAGACG GCCGATGTGG AGCTTATCGG CTATGAAAAC GTGGCTTCTG GCTACTGTTC CGCCCTTGTT CAGGGCGACG TGGCGGCCTG CAAATCCGCA GTGGAGGCGG GCGTCAAGGC CGTAAAAAAT ATGGGTACAG ACGTCTACAG TTCTTGCGTC ATCCCCACCC CTCACCGGCA TCTTGTAAAA CTTGTACGGC GGTACACCCT GGCCTAG
|
Protein sequence | MLYAGEEALG LIETLGMVPA IYGADNMLKA ADVELIAYEN VGSTLVTIMV KGDVAAVQAS VAAGAAAAAT IGKLTAQNVM PRPVRGVGGI AMAHVVDSIP EGDPGLRSLG MIETFGIVYL MEAADAMIKT ADVELIGYEN VASGYCSALV QGDVAACKSA VEAGVKAVKN MGTDVYSSCV IPTPHRHLVK LVRRYTLA
|
| |