Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1343 |
Symbol | |
ID | 7285036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1611202 |
End bp | 1613469 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643582149 |
Product | TonB-dependent receptor |
Protein accession | YP_002479923 |
Protein GI | 220904611 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGGTA GAGCAAGGAT TGTTTCTGTG GTTGGTCTGT GTTCAATGCT GCTTTCGGCA TTGGCCATGC CGGTATTCGC TGCTGAAGGC GTGGAGCCAA AGTCTGAAGA AGGAATCACT CTTGATGTCG TGCGGGTTAC TGCCCAGAAA AGGGCAGAAA CACTGAATGC CGTGCCAATG AGCCTTGAGG TCACAACAGC TGATGATCTG AAGGCCTCGC ATATTACAAA GGTTGAAGAT GTGCTGGCGG CAACGCCCAA TGCCATGTTT TCATCGGGTT CTGTGGCGGG GGCCATGTCG CCGTATTTCA GTATCCGTGG TGTGGGTTCT GCAGAAATTG AAACAGATCC CTCCGTGGGC GTGTTTGTAG ACGGTGTTCC GCTTACGCTT ATCCACGGCT ATTTGAACAA TCTGCTGGAC GTGGAACGGG TTGAAGTGTT GCGTGGTCCG CAGGGCACCC TGTATGGCCG CAACACTCTT GGCGGCGCTG TTAATGTCAC TTCCAAGAAA GCTGATCCCA GCAAACAGGA AGGGCGCATA ACCGTTGGCG CGGGCAACAA GGAGCATTTT CGTACTGAGG TTATGGCCAA CACTCCTCTT TGGGACGGCA AGGCCGCTGT GCGCGCTGCC TTTGGTTACG ACCAGTACGG TCACGTGTGG GATAACGATC GGGGCGGTAA TGTAGGCAAG CAAAACAATT ATCAGGGACG CCTGAGCTGG TTCATGATGC TTGGCGAAAA TACTACCGCC GATTTCAGCG CCGATCTGCA GAAGCAATAC CGCAAGGATG GCGCGGTCAT GACCTTGGCC GACTACGAAA ACGGCGACCG TTCGTACAAT ATTGCAGACC CGCTTGGCGG GAGCATCACC TCCGGCGGCG CCAGGCTTGA AATCAATCAT GACTTTGACA GCGGTTACAA GCTGACCTCT CTCACCGGTT ACCGCAGCAC GGCAATGGAC TATGACGGAA GCTATGCGCC GGTGGGCTTT TTCAATGTTA CAAATGCCCG CTTCAATGCT TTTGGTTTTG AGAATTTTCA GTTCCGCGAC CACGGTAACT TTGTTGAAAG CTTTGGGCAG ATATCTCAGG AGCTTCGGTT GACTTCTCCT GAAGATCAGG ACTTCAAGTA TGTGGCAGGC GTTTATGCTG ATTATAACAG GATGGATCGC AGAAACGGCC TGACAAATAC GTGGGATCAA GGCTCACCAT TCTTCCCCTG GTCTGCGAAA AGCGACCATG CCACTCTGGA TCTGCGAGGG CAGCAAAATG CCTGGTCTGT AGCAGCATTT GGCAACGCAT CCTACGACTT TAACGAATAC TGGCAGATTT TTGGCGGCCT TCGCATCGGG TATGACAAGA AATCGTATGA ATTTGACGCT TCTTCCAACC TTGGTGAGGA TTATATCAGG GATTTCTGGG AGTCACCCGG CCTGACCATG GTCAAGGATT ATGACAGCGA ATGGGATAAG GTATACCTGA CGCCACGCGG TGGTCTTAAG TATAGTTTTA ATGAATTCAA TAATATATAC TTCAGCGTAA GCAGCGGTTA CAAGTCCGGC GGTTTTTCCA CTTCCTTGTT CTACAACAAG CCTGGTTTCA AGTACGATGA GGAAACTACC GTCAACTATG AACTTGGTAT GAAAAATACC TTTCTTGATG GTCGTGTAAC CCTGAACAGC GCTCTTTTCT ACATCGACTG GAGAGACCAG CAGGTAATGT CCTATGACTC TGCTACCGGC ATCACCGGTA TTGTCAATGC TCCTCAAAGC CAGTCTTACG GCTTTGAAAT GGATATTATG GGCAAGTTCG ACAACGGAAT TCATGTGGGC ATCGGCGCTG GCTATGCTGA TGCCACCTAC GTCGACTTCA GCAATGCTCC CGGAACGTAT GGCGGATCTG TAGACGCCAG CGGCAATCAG CAACAGTACC ATTCAAAGTT CACGGGGCGG GCCAACGCCG GCTACGAATT TGAGTTGCCT TGGGACGATC TGGTGGCGAG CGTCGACCTG ACTTTCCGTT ACCGTTCAAG CTACTACTAT GACATCGAAA ACAAGCTTGA GCAGGAAGGT TACGGCACCT TTGACATGAA CATCGGGGTG GGCAACGACT CCTATGAGGT GAACCTCTGG GGCAGAAACC TTCTGAACCA GGCGGCCACT GCATCGCAGA CATATATGAA CGGAATGCAT GCCACGCATG ACCAGAATAC TGTGGTCAGT CTTATTGACC CGCTGATGTT CGGTATCAAC TTCACCAAAA AATTCTAG
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Protein sequence | MVGRARIVSV VGLCSMLLSA LAMPVFAAEG VEPKSEEGIT LDVVRVTAQK RAETLNAVPM SLEVTTADDL KASHITKVED VLAATPNAMF SSGSVAGAMS PYFSIRGVGS AEIETDPSVG VFVDGVPLTL IHGYLNNLLD VERVEVLRGP QGTLYGRNTL GGAVNVTSKK ADPSKQEGRI TVGAGNKEHF RTEVMANTPL WDGKAAVRAA FGYDQYGHVW DNDRGGNVGK QNNYQGRLSW FMMLGENTTA DFSADLQKQY RKDGAVMTLA DYENGDRSYN IADPLGGSIT SGGARLEINH DFDSGYKLTS LTGYRSTAMD YDGSYAPVGF FNVTNARFNA FGFENFQFRD HGNFVESFGQ ISQELRLTSP EDQDFKYVAG VYADYNRMDR RNGLTNTWDQ GSPFFPWSAK SDHATLDLRG QQNAWSVAAF GNASYDFNEY WQIFGGLRIG YDKKSYEFDA SSNLGEDYIR DFWESPGLTM VKDYDSEWDK VYLTPRGGLK YSFNEFNNIY FSVSSGYKSG GFSTSLFYNK PGFKYDEETT VNYELGMKNT FLDGRVTLNS ALFYIDWRDQ QVMSYDSATG ITGIVNAPQS QSYGFEMDIM GKFDNGIHVG IGAGYADATY VDFSNAPGTY GGSVDASGNQ QQYHSKFTGR ANAGYEFELP WDDLVASVDL TFRYRSSYYY DIENKLEQEG YGTFDMNIGV GNDSYEVNLW GRNLLNQAAT ASQTYMNGMH ATHDQNTVVS LIDPLMFGIN FTKKF
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