Gene Ddes_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1343 
Symbol 
ID7285036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1611202 
End bp1613469 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content51% 
IMG OID643582149 
ProductTonB-dependent receptor 
Protein accessionYP_002479923 
Protein GI220904611 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGTA GAGCAAGGAT TGTTTCTGTG GTTGGTCTGT GTTCAATGCT GCTTTCGGCA 
TTGGCCATGC CGGTATTCGC TGCTGAAGGC GTGGAGCCAA AGTCTGAAGA AGGAATCACT
CTTGATGTCG TGCGGGTTAC TGCCCAGAAA AGGGCAGAAA CACTGAATGC CGTGCCAATG
AGCCTTGAGG TCACAACAGC TGATGATCTG AAGGCCTCGC ATATTACAAA GGTTGAAGAT
GTGCTGGCGG CAACGCCCAA TGCCATGTTT TCATCGGGTT CTGTGGCGGG GGCCATGTCG
CCGTATTTCA GTATCCGTGG TGTGGGTTCT GCAGAAATTG AAACAGATCC CTCCGTGGGC
GTGTTTGTAG ACGGTGTTCC GCTTACGCTT ATCCACGGCT ATTTGAACAA TCTGCTGGAC
GTGGAACGGG TTGAAGTGTT GCGTGGTCCG CAGGGCACCC TGTATGGCCG CAACACTCTT
GGCGGCGCTG TTAATGTCAC TTCCAAGAAA GCTGATCCCA GCAAACAGGA AGGGCGCATA
ACCGTTGGCG CGGGCAACAA GGAGCATTTT CGTACTGAGG TTATGGCCAA CACTCCTCTT
TGGGACGGCA AGGCCGCTGT GCGCGCTGCC TTTGGTTACG ACCAGTACGG TCACGTGTGG
GATAACGATC GGGGCGGTAA TGTAGGCAAG CAAAACAATT ATCAGGGACG CCTGAGCTGG
TTCATGATGC TTGGCGAAAA TACTACCGCC GATTTCAGCG CCGATCTGCA GAAGCAATAC
CGCAAGGATG GCGCGGTCAT GACCTTGGCC GACTACGAAA ACGGCGACCG TTCGTACAAT
ATTGCAGACC CGCTTGGCGG GAGCATCACC TCCGGCGGCG CCAGGCTTGA AATCAATCAT
GACTTTGACA GCGGTTACAA GCTGACCTCT CTCACCGGTT ACCGCAGCAC GGCAATGGAC
TATGACGGAA GCTATGCGCC GGTGGGCTTT TTCAATGTTA CAAATGCCCG CTTCAATGCT
TTTGGTTTTG AGAATTTTCA GTTCCGCGAC CACGGTAACT TTGTTGAAAG CTTTGGGCAG
ATATCTCAGG AGCTTCGGTT GACTTCTCCT GAAGATCAGG ACTTCAAGTA TGTGGCAGGC
GTTTATGCTG ATTATAACAG GATGGATCGC AGAAACGGCC TGACAAATAC GTGGGATCAA
GGCTCACCAT TCTTCCCCTG GTCTGCGAAA AGCGACCATG CCACTCTGGA TCTGCGAGGG
CAGCAAAATG CCTGGTCTGT AGCAGCATTT GGCAACGCAT CCTACGACTT TAACGAATAC
TGGCAGATTT TTGGCGGCCT TCGCATCGGG TATGACAAGA AATCGTATGA ATTTGACGCT
TCTTCCAACC TTGGTGAGGA TTATATCAGG GATTTCTGGG AGTCACCCGG CCTGACCATG
GTCAAGGATT ATGACAGCGA ATGGGATAAG GTATACCTGA CGCCACGCGG TGGTCTTAAG
TATAGTTTTA ATGAATTCAA TAATATATAC TTCAGCGTAA GCAGCGGTTA CAAGTCCGGC
GGTTTTTCCA CTTCCTTGTT CTACAACAAG CCTGGTTTCA AGTACGATGA GGAAACTACC
GTCAACTATG AACTTGGTAT GAAAAATACC TTTCTTGATG GTCGTGTAAC CCTGAACAGC
GCTCTTTTCT ACATCGACTG GAGAGACCAG CAGGTAATGT CCTATGACTC TGCTACCGGC
ATCACCGGTA TTGTCAATGC TCCTCAAAGC CAGTCTTACG GCTTTGAAAT GGATATTATG
GGCAAGTTCG ACAACGGAAT TCATGTGGGC ATCGGCGCTG GCTATGCTGA TGCCACCTAC
GTCGACTTCA GCAATGCTCC CGGAACGTAT GGCGGATCTG TAGACGCCAG CGGCAATCAG
CAACAGTACC ATTCAAAGTT CACGGGGCGG GCCAACGCCG GCTACGAATT TGAGTTGCCT
TGGGACGATC TGGTGGCGAG CGTCGACCTG ACTTTCCGTT ACCGTTCAAG CTACTACTAT
GACATCGAAA ACAAGCTTGA GCAGGAAGGT TACGGCACCT TTGACATGAA CATCGGGGTG
GGCAACGACT CCTATGAGGT GAACCTCTGG GGCAGAAACC TTCTGAACCA GGCGGCCACT
GCATCGCAGA CATATATGAA CGGAATGCAT GCCACGCATG ACCAGAATAC TGTGGTCAGT
CTTATTGACC CGCTGATGTT CGGTATCAAC TTCACCAAAA AATTCTAG
 
Protein sequence
MVGRARIVSV VGLCSMLLSA LAMPVFAAEG VEPKSEEGIT LDVVRVTAQK RAETLNAVPM 
SLEVTTADDL KASHITKVED VLAATPNAMF SSGSVAGAMS PYFSIRGVGS AEIETDPSVG
VFVDGVPLTL IHGYLNNLLD VERVEVLRGP QGTLYGRNTL GGAVNVTSKK ADPSKQEGRI
TVGAGNKEHF RTEVMANTPL WDGKAAVRAA FGYDQYGHVW DNDRGGNVGK QNNYQGRLSW
FMMLGENTTA DFSADLQKQY RKDGAVMTLA DYENGDRSYN IADPLGGSIT SGGARLEINH
DFDSGYKLTS LTGYRSTAMD YDGSYAPVGF FNVTNARFNA FGFENFQFRD HGNFVESFGQ
ISQELRLTSP EDQDFKYVAG VYADYNRMDR RNGLTNTWDQ GSPFFPWSAK SDHATLDLRG
QQNAWSVAAF GNASYDFNEY WQIFGGLRIG YDKKSYEFDA SSNLGEDYIR DFWESPGLTM
VKDYDSEWDK VYLTPRGGLK YSFNEFNNIY FSVSSGYKSG GFSTSLFYNK PGFKYDEETT
VNYELGMKNT FLDGRVTLNS ALFYIDWRDQ QVMSYDSATG ITGIVNAPQS QSYGFEMDIM
GKFDNGIHVG IGAGYADATY VDFSNAPGTY GGSVDASGNQ QQYHSKFTGR ANAGYEFELP
WDDLVASVDL TFRYRSSYYY DIENKLEQEG YGTFDMNIGV GNDSYEVNLW GRNLLNQAAT
ASQTYMNGMH ATHDQNTVVS LIDPLMFGIN FTKKF