Gene Ddes_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1331 
Symbol 
ID7285024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1581297 
End bp1583087 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content56% 
IMG OID643582137 
ProductABC transporter related 
Protein accessionYP_002479911 
Protein GI220904599 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACTG CGCCAGAAAA AATGCAAAGC CCGCTTACTG TCTACTGGCA GGCTGCCATG 
CCGGAGTGGG GCAAACTTTC GGTGACGCTT TTGCTTGCCT GCTTTGCTGC ATTGCTTGAA
ATTGTACCTT TTATCCTGAT CTGGCATATG GCCGGAGAAG CCATGAGCGA TACGCCCCAG
GTGAATACCA TTCTCTGGCT GACAGGAGGA ATCTTTGGGG CCGTGGTTTT GCGCTTTCTG
GCGCAAGGGG GAGTAACCAT ACTCGGCCAT CTGGCCGGGT TTCGGTCAGA GTGCCGCCTG
CGCAGCCAGC TTGTGGAGCG GATAAAATCG GTTGTTCCTG TGGCAGTGGA AGGGAAAAAC
AGCCACTTGA GCCGGGCTGT TATGGATGAG GTGGGGCGTC TCAACGGCAT CCTGGCCCAC
ACCATTCCCG ATGCGGTAGC CGGATTGTTT CTGTCGCTGG TGTGCGTGGC GTTGCTGTTC
TGGATCGACT GGCGGCTTGC ACTGGCCTCT CTTGTCATGC TCGCGCTCGG GGTGTGGGCC
CAGGGGCGGA TTGCAAGGTC ATCGCCGGAA CTTTTCGTGC GCTGGGTACA GGCGGATGGC
AGGGCTTCTT CCGCGCTTCT TTCCTACGTC AGAGGACTGG CCACATTGCG GGCTTTCAAC
CGTCAGGCGG ATTCTCTTGA AGAAGTGACA GACAGTATTT TTGCCATTGG CAGGCTGGCG
GGAGACGTAA CCCGTGTCTG CGCCATGCCT TATTCCCTTT TCGGCCTGGC CATGACGACT
CCGCTGCTGG TGGTGTTGCC CTTCGCACTC CTGTTTTACG CATCGGGTTC GCTTACAGCT
TCGGATCTGC TTTTTGCCAC GGCAGTCAGT GGAGTCATGC TTCTTCCCCT TACCAAGGTC
ATGATGAGCC TGTCGGCCCT GCGGATATTT CAGGCCGGAG CAGCCCAGAT TCAGGCTGTG
CAAAATCTGC CCGTGTTTGA CGAGCCGGCT TCGCCCCAGT CCGTCGCAGG TGCTGAAATT
ATTTTTGAAA ACGTCTCCTA CCGGGTGAAA TCCGGCTCGG GAGACGACGT TACTATACTA
CAGGATGTAA GTTTTACGCT GCCGCAGGGC CGCATCACTA CGGTGACCGG TCCGTCCGGT
TCAGGGAAGA CAACCCTGGC AAGACTTCTG GCACGTCTTG ATGACGTTTC TGCTGGCCGT
GTTCTTATCG GTGGACAGGA TATCCGCTCC ATTCCCCCAC AACTGTTCCA GCGTCTCATC
AGCATTGTTT TTCAGGATGC TTTTCTTTTT CACGGCACTA TCCGCGAAAA CATCCTTCTG
GCCAGACCGG ATGCGACGGA AGACGAACTG CTTCAGGCTG TGGAAGCGGC AGGCTGCACA
GAAATGTTGA CGGTTTTACC CCTGGGGCTG GATACCCCTG TGGGGGATAA GGGCTTTGGC
CTTTCCGGCG GCGAGCAGCA GCGTATAGCC ATCGCACGTG CTTTTTTGAA AAATGCGCCC
ATTCTGATTC TTGATGAGGC CACCGCCCAC CTCGACCCCA TTGCGGCCAA GGATGTGTCA
CGCAGCTTGA ACCGGCTGAT GGCGGGCAGA ACCGTTTTTG CCATTTCGCA CCGTCTGCAC
GAAATTGAAA ATGCCGATTC CACTCTCCTT ATTGTTGGCG GTTCCCTTGA AGAAAAGGGA
ACGCATGAAG AACTGCTGGC ACGTTCTGCA ATCTATCAAA ATCTATGGTC CCTGCAGAGG
CGGTCAAATT CGTGGCGGCT CGGCAGAGAG CGCGTGAGGG GAGAGGTATG A
 
Protein sequence
MSTAPEKMQS PLTVYWQAAM PEWGKLSVTL LLACFAALLE IVPFILIWHM AGEAMSDTPQ 
VNTILWLTGG IFGAVVLRFL AQGGVTILGH LAGFRSECRL RSQLVERIKS VVPVAVEGKN
SHLSRAVMDE VGRLNGILAH TIPDAVAGLF LSLVCVALLF WIDWRLALAS LVMLALGVWA
QGRIARSSPE LFVRWVQADG RASSALLSYV RGLATLRAFN RQADSLEEVT DSIFAIGRLA
GDVTRVCAMP YSLFGLAMTT PLLVVLPFAL LFYASGSLTA SDLLFATAVS GVMLLPLTKV
MMSLSALRIF QAGAAQIQAV QNLPVFDEPA SPQSVAGAEI IFENVSYRVK SGSGDDVTIL
QDVSFTLPQG RITTVTGPSG SGKTTLARLL ARLDDVSAGR VLIGGQDIRS IPPQLFQRLI
SIVFQDAFLF HGTIRENILL ARPDATEDEL LQAVEAAGCT EMLTVLPLGL DTPVGDKGFG
LSGGEQQRIA IARAFLKNAP ILILDEATAH LDPIAAKDVS RSLNRLMAGR TVFAISHRLH
EIENADSTLL IVGGSLEEKG THEELLARSA IYQNLWSLQR RSNSWRLGRE RVRGEV