Gene Ddes_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1312 
Symbol 
ID7285004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1555658 
End bp1556968 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content60% 
IMG OID643582117 
Producthypothetical protein 
Protein accessionYP_002479892 
Protein GI220904580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00429215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAC GTATAGCTGT AAGCATGCGT GGCCCCATGC GGGCGCTTGC CAGTCAGGGC 
ATACTCGCCA CAGATTGCCA CGCCCAACTC AAAGCCATAC TGCTGCAAAA GCTGGGTCCG 
GAACATGCCG CCCTGCTGGC TGAGCCGCAA CATGATGCCG AAGGCAGCAG CGTGGACTGG 
TATGCTGAAG GGCAAGGCCC CGCGATTGCC CTTAAAGATC TTCCGGAAGA AGATGCCAAT 
ACCCTGCGCG CCAGGGCGAC CTCTCTGGCC AATGATATCG CCGCTCTCTC AGGTACGCTT 
ACTTCTGATG CACAGGCCCG CCAAGCGCTC TCGGGCCAGT TGCTGCGTCT TGCCCTGCAA 
CACCCATCGG ATGGTGATAT CTGGTCTGTG AACGGGCAGC CTGTACTTGT CAACTGGGGC 
TTTGCCCCAG GCAGTGCAGG AGCCTTGCCT CAGGACCTGA CCCGACTGGG CGCTGCACTG 
CCCCCGCCGC CAGTGCCACC TGTTCCCGCC CCGGCAGCCG GAGCGGGCTG CCTGCCCTGG 
CTCTTGCCCC TGCTTCTGCT TTTGCTTTTA CTCTGGCTTC TCGGTGCGGC ACTGGGTCTT 
TTCCCCTCCC CCCTGCCTGC GGGCTGCCTG CCTGTGGACC GCAAAAATCT TGTGGCCGAA 
GAACAGCGAG CTGCGGCTCT GGATGACGAA CTGGCGCTCT TGTGGAGCCA GCTTTTGGAG 
CGGGCAGCGC TGTGCAAACC CGTAAAACCT GCTCCCGTCC AGGAAGAAAA GGAAGAGCCG 
GTGGCCCCCC TGCCGGAACC TGAAATAGTA GAGCCATTCC TGGGTGAGAC CCCACCGGCA 
CCCAAGCCTG TGCCGCAGCC CAAACCGGAA AAACCCAAGG AACAGCCCAA ACCTGTGGAG 
CCTCCCAGGC AACCGGAAAA ACCCAAGAAA AAAAACGAGG ACCTGACCAT CCCGCAGGAT 
GCCGCCAAAA AGAACGATCT GAGTTTTCTT GAAGGCTGCT GGACCAGCGA AACCGGCCTG 
TATTCGCACC CGTCCAACGA GCCTATTGTG GCGGAGTACT GCTTTGATAA AAAAGGCAAG 
GGCCGCCGCT TTGTGCGCGA GCGCAACGGG CAGGTCTGCA GCGGGTCCGC AAATGCCCGT 
TTTCAGGGCA ACAGGCTGAA TTTTGAATCC GACCAGGCCA GATGCCCCCG TGGCGGCACA 
TATGTTCCCC AAAAGGTGGA ATGCACCGGC AGTGAAAACA CAACCCAGTG CAAGGGCAGA 
GAACTGGGCG CGGGCAATAA TAAATGGGAC GCCCGCTTCA GAAGGAAATA A
 
Protein sequence
MSIRIAVSMR GPMRALASQG ILATDCHAQL KAILLQKLGP EHAALLAEPQ HDAEGSSVDW 
YAEGQGPAIA LKDLPEEDAN TLRARATSLA NDIAALSGTL TSDAQARQAL SGQLLRLALQ 
HPSDGDIWSV NGQPVLVNWG FAPGSAGALP QDLTRLGAAL PPPPVPPVPA PAAGAGCLPW 
LLPLLLLLLL LWLLGAALGL FPSPLPAGCL PVDRKNLVAE EQRAAALDDE LALLWSQLLE 
RAALCKPVKP APVQEEKEEP VAPLPEPEIV EPFLGETPPA PKPVPQPKPE KPKEQPKPVE 
PPRQPEKPKK KNEDLTIPQD AAKKNDLSFL EGCWTSETGL YSHPSNEPIV AEYCFDKKGK 
GRRFVRERNG QVCSGSANAR FQGNRLNFES DQARCPRGGT YVPQKVECTG SENTTQCKGR 
ELGAGNNKWD ARFRRK