Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1308 |
Symbol | |
ID | 7285000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1551245 |
End bp | 1552525 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643582113 |
Product | HI0933 family protein |
Protein accession | YP_002479888 |
Protein GI | 220904576 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0313133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGT CCAGCAACCC TGTTCCTGCA CCTGCGCGCG TTCCGTACGG CCTTGCCGGA ACAAAAAAAC ATGTGGATGA AAGCCAGGCG GACGTGCTTG TTCTGGGCGC GGGAGCTTCC GGACTTATCT GCGCCCGGGA AGCCGCAGGA AGGGGCTTGC GTGTAACCGT ACTTGAGCGC GGTGCTGTTC CGGCGCGCAA GCTTGCCATC AGCGGCGGCG GAAAAGCCAA CTTTACCAAC CGCCGCGTGA CCTCGCAGGA CTACCGCTGT GATGGTCCCG AAGGCAGCGA TTTTTGCGCC CCGGCCCTGC AGGCTTTCGC CCCGGCCGCC ATACAGCGCA TGGTCCGGCA GTGGCGTCTG CCTTTTGAAG AAAGAGAACA CGGCCAGCTT TTTCTGATTG TACCCGCACA AAAACTGGTC CAGGCTCTTA TGACAGACTG CCGTCAGCGC GGCTGTCGTA TCGAATTCGA TAGTCCTGTG GAAACGCTAA ATTTTTCAGA CGGTATTTTT GTAGTGCATA CTCCTGCCAG AGTGTGGCGC GCCCCTGCCG TAGTGCTGGC CATGGGCAGC CCCGCCTGGC CCCAGGCAGG GGGAAGCGGG CACGGCTACA GGCTTGCCCA GCAGTTGGGG CACAGCCTGG TACCGCCGTG CCCGGCCCTG ACCCCCCTGT TGCTGCCTCA GGGACACATT CTCACCAGCC TGTCTGGCAT CAGCCTGCCT GTTCGCATTT CTGCAGAAAC GCATCACTGG CAGGACCACC TGCTATTCAC GCACAGCGGC CTCAGCGGAC CGGCCGCGCT CAAGGCTTCG CTGTTTTGGG AAAGCGGAAT GCAGATTCGC GTAAATTTTC TTCCCGACCG CGGCTTCAAA GCCCTGCTAG ATGCGCCAGA AGCCGGAAAG CAGACCCCAC GGACCCTGTT GGGGCGTCTT TTGCCCCAAC GCCTTGCGGA TGCGCTGCTG CCACAGGAAA ATGCGCGAAA AAAAATTGCG GAGCTTTCAC GCGCGACACG CAACAGCTTG GTGGAGTCTG TACACGCTCA TAGCCTTTTA CCGGTAGGGG CCGCAGGACT CAAAAAGGCG GAAGCCTGCC GCGGCGGTGT GCAGACCGGC GAAATAAACG CGCAAACCAT GCAAAGCCGT CTTTGTCCGG GCCTGTTCAT CACTGGCGAA CTGCTGGATG TAACGGGCCT TCTGGGCGGC TACAATCTGC ATTGGGCCTG GGCCAGCGGC ATGGCTGCAG GAAAGGCTCT GCCCTTGCCC GCAGTACAGT GCGACAGCTA G
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Protein sequence | MTTSSNPVPA PARVPYGLAG TKKHVDESQA DVLVLGAGAS GLICAREAAG RGLRVTVLER GAVPARKLAI SGGGKANFTN RRVTSQDYRC DGPEGSDFCA PALQAFAPAA IQRMVRQWRL PFEEREHGQL FLIVPAQKLV QALMTDCRQR GCRIEFDSPV ETLNFSDGIF VVHTPARVWR APAVVLAMGS PAWPQAGGSG HGYRLAQQLG HSLVPPCPAL TPLLLPQGHI LTSLSGISLP VRISAETHHW QDHLLFTHSG LSGPAALKAS LFWESGMQIR VNFLPDRGFK ALLDAPEAGK QTPRTLLGRL LPQRLADALL PQENARKKIA ELSRATRNSL VESVHAHSLL PVGAAGLKKA EACRGGVQTG EINAQTMQSR LCPGLFITGE LLDVTGLLGG YNLHWAWASG MAAGKALPLP AVQCDS
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