| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1296 |
|---|
| Symbol | |
|---|
| ID | 7284988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1533445 |
|---|
| End bp | 1535220 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643582102 |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_002479877 |
|---|
| Protein GI | 220904565 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGG ATCCTACCAA GCACCCTGAC TGGAAAATCG CTCTTGATGC GGAATCCCGC
ATGAAAACCG TTGAAACCCT TGCTGCAGAA CTGGGCCTTG AAAAGGCTGA ACTGCTGCCG
TATGGGCATT ATATGGGCAA GGTTGAGCAG CAGGCCGTGA TGCAGCGGCT AAAAGACCGC
CCCAACGGAA AGTATATTGA TGTTACTGCT ATCACCCCCA CGCCTTTGGG GGAGGGCAAG
TCTACAACCA CCATCGGCCT TGTGCAGGGT CTTGCACGAC GCGGGCGGCG TTCTTCAGCG
GCTATCCGTC AACCTTCCGG CGGACCCACC ATGGGTATGA AAGGCTCCGC CGCAGGCGGC
GGGCTTTCGC AATGCATTCC GCTGACCCCC TATTCTCTCA ATTTTACCGG CGACCTCCAT
GCCGTGGGCG CGGCCCACAA CCTGGGCATG ACGGCTTTGA CATCGCGCAT GCAGCATGAG
CGCAATTATG ACGATGCCAC GCTGGAAAAA CTTTCGGGTA TGGCGCGTCT GAATATCGAC
CCCACCAGAA TCAATACCGG CTGGGTCATG GATTTTTGTG TTCAGGCCCT GCGCAACATC
ATTATCGGCA TCGAGGGTGA TGGGCGACGT AATGATGGTT TCATGATGCG TTCGCACTTT
GACATTACCG TTGCCTCTGA AGTTATGTGC ATCCTTTCCA TTGCCCGCGA CCTGCGCGAC
CTGCGCGAGC GGATGGGACG GATGGTGCTG GCACATGACC GCAACGGCAA ACCTGTGACC
ACCAGCGACC TGGGCGTTGC CGGGGCCATG ACTGCCTGGC TGGTAGAGGC CGCCAAACCC
AACCTTATCC AGACCATTGA AGGGCAGCCC GTTTTTGTGC ATACCGGGCC TTTTGCCAAT
ATTGCCCTTG GGCAAAGTTC GGTCATTGCC GACAGGGTGG CGCTCAAACT CAGCGACTAT
CATGTGACGG AATCCGGCTT TGCTGCAGAA ATGGGCTACG AAAAATTCTG GAACCTCAAA
TGCCATTATA GCGGCCTTGT GCCTGACGCA GCTGTTGTTG TGGCTACAGT GCGGGCGCTC
AAAAATCACG GTGGTGCTCC CCAGCCCAAA CCCGGTCAGG CACTGCCAGA GCCCTATACC
CGTGAAGACG TGGGCCTTGT GGAAGCCGGA TGCGCCAACC TGCTGCATCA TCTGGGCATT
GTACGGCGTT CGGGCGTACC CGCAGTGGTC TGCATCAATA AGTTCCATAC CGATACCAAG
GCAGAGGTCG ACGCCATCCG TCGCATTTGC GAGCAGGCCG GAGCAAGGGT AGCCCTGTCG
GAGCACTGGG AAAAAGGCGG AGAGGGCGCT CTGGAACTTG CTGACGCCGT TACGGACGCC
TGCAATGAAA AGAACGAATT CCGGCCGCTC TACAATTGGA ATTCGCCTCT TACCGAGCGC
ATCACGACCA TTGCTCAGGA GGTTTACGGG GCTGACGGAG TGGAGTTTGA GCCGCTTGCA
GCCCAGCGCC TCAAAGATTT GCAGGAAAGA CCCGATGCTG ATGAACTGGG CGTCTGCATG
GTGAAGACCC AATATTCCCT GTCTGACAAG CCTGCGCTCA AGGGCGTTCC CAAGGGCTGG
AGGCTGCATG TGCGCGATGT GCTTTTCTTT GGCGGCGCGG GGCTTGTTGC CCCGGTGTCC
GGCGATATCA GCCTGATGCC GGGGACCGGT TCAAAACCGG CTTTCCGCAA CATTGATGTG
GACGTGGAGA CCGGCAAGGT AACAGGACTC TTCTAG
|
|---|
| Protein sequence | MTLDPTKHPD WKIALDAESR MKTVETLAAE LGLEKAELLP YGHYMGKVEQ QAVMQRLKDR
PNGKYIDVTA ITPTPLGEGK STTTIGLVQG LARRGRRSSA AIRQPSGGPT MGMKGSAAGG
GLSQCIPLTP YSLNFTGDLH AVGAAHNLGM TALTSRMQHE RNYDDATLEK LSGMARLNID
PTRINTGWVM DFCVQALRNI IIGIEGDGRR NDGFMMRSHF DITVASEVMC ILSIARDLRD
LRERMGRMVL AHDRNGKPVT TSDLGVAGAM TAWLVEAAKP NLIQTIEGQP VFVHTGPFAN
IALGQSSVIA DRVALKLSDY HVTESGFAAE MGYEKFWNLK CHYSGLVPDA AVVVATVRAL
KNHGGAPQPK PGQALPEPYT REDVGLVEAG CANLLHHLGI VRRSGVPAVV CINKFHTDTK
AEVDAIRRIC EQAGARVALS EHWEKGGEGA LELADAVTDA CNEKNEFRPL YNWNSPLTER
ITTIAQEVYG ADGVEFEPLA AQRLKDLQER PDADELGVCM VKTQYSLSDK PALKGVPKGW
RLHVRDVLFF GGAGLVAPVS GDISLMPGTG SKPAFRNIDV DVETGKVTGL F
|
|---|
| |