Gene Ddes_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1289 
Symbol 
ID7284981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1519686 
End bp1520264 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID643582095 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002479870 
Protein GI220904558 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AAAGCAAAAA AGAAGCGTTG CTCCAGGCGG CCAAGGATCT GTTTGGCGAG 
TGTGGCTATG TAGAAACCAC TTTCAAAAAG ATTTCCGACA GGGCAGGGGT CGCGCTAGGC 
CTGCTGACCC ACCATTACGG CAACAAGGAA AAGCTTTTTC TGGCATCCGG CCTTGATGTG 
CTGGAGCATT TTCTGCAAAA GCTGCGTCAG GCCACTGCCG ATGCCGATTC AGGCTTTGAC 
GGCGTCATGC GTTTTTGCAA GGCATATCTT GATTTTTCCA TTGACAAGGA TTCCAACTGG 
CTGGTGCTTG TACGATGTTC GCCGTACAGC GACATGAAAA CCAAGACAGA CCGTGACACT 
ATGGATTCCA TGTTTTCACA GGTGCATCAG GAGCTGGAAA AAGTCATTTC CCGCGGCATC 
GAAGACGGCA GCCTGGTTAC GGTGGACAGC AAGTCCACAG CTCAGGTGAT TATTTCACTT 
ATGGTAGGCG CCAACCGCAC ACGGGTTCTC ACTCCGTATG CCGCGCCGAC ATTGTACAAA 
GATGTACTGG ACTTTGTAGC CCGTTCCATA AAGGCCTGA
 
Protein sequence
MMNKSKKEAL LQAAKDLFGE CGYVETTFKK ISDRAGVALG LLTHHYGNKE KLFLASGLDV 
LEHFLQKLRQ ATADADSGFD GVMRFCKAYL DFSIDKDSNW LVLVRCSPYS DMKTKTDRDT 
MDSMFSQVHQ ELEKVISRGI EDGSLVTVDS KSTAQVIISL MVGANRTRVL TPYAAPTLYK 
DVLDFVARSI KA