Gene Ddes_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1285 
Symbol 
ID7284977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1515304 
End bp1515936 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content58% 
IMG OID643582091 
Productphosphoheptose isomerase 
Protein accessionYP_002479866 
Protein GI220904554 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.939986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA GCGCTCTTGA CATCATAACC GCCCATGCGC GTGACGGCGC CCGGCTGAGG 
GAAACTTTTT TTGCGGAACA AGCGACAATG TTGCGGGAAA CAGCCCTGCG CATTGCAGCC 
TGTCTTGCTC GGGGCGGAAA AATCCTGCTC TGCGGCAATG GCGGCAGCGC AGCAGATGCA 
CAGCACCTTG CGGCGGAGTT TGTGAACCGC TTTCTTGTGG ACAGGCCTGC CCTGCCGGCT 
CTGGCCCTTA CCACCGACAC CTCGGCCCTT ACCGCCATTG CCAATGATAT GGACTTCAGC 
CAGGTATTTT CACGCCAGGT GGAGGCACTG GGCCGCAAGG GAGACATTCT TGTAGGCATA 
TCCACCTCCG GCAACAGCCC CAATGTGCTG GCCGCCCTTG AGGCTGCCCG CCGGATAGGC 
ATGCTTACGC TGGGCTTTAC GGGCAGGGGC GGAGGCCGTA TGGCCGCGCT CTGCCACATG 
CTCGTGGACG TGGCAAATCC GAGCACTCCC CTTATACAGG AAATTCACAT TACTGCCGGA 
CATTTACTGT GCCAGCTGAC TGATTATTAC CTTTTTGAGA ATGTGGCGGC ACTTGCGCCC 
TATTTGCACG CAGACACCGT AAACGAGGAT TGA
 
Protein sequence
MNDSALDIIT AHARDGARLR ETFFAEQATM LRETALRIAA CLARGGKILL CGNGGSAADA 
QHLAAEFVNR FLVDRPALPA LALTTDTSAL TAIANDMDFS QVFSRQVEAL GRKGDILVGI 
STSGNSPNVL AALEAARRIG MLTLGFTGRG GGRMAALCHM LVDVANPSTP LIQEIHITAG 
HLLCQLTDYY LFENVAALAP YLHADTVNED