Gene Ddes_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1260 
Symbol 
ID7284945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1481636 
End bp1482490 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID643582059 
Productflagellar hook capping protein 
Protein accessionYP_002479841 
Protein GI220904529 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCA TTACACAGTC ACTGAACAGA ACCAATAATG AATTCAATAC CGCCCTGAGC 
AAGCAAAAGG GCAGTAATCT GGACAAGGAT TCCTTCATGC TGCTGCTGGT TACGCAGTTC 
AAGTACCAGG ACCCGCTCAA TCCGATGGAA GACAAGGAAT TTATTGCCCA GATGGCGCAA 
TTCTCCAGTC TTGAGCAGCT CATGAATCTC AATACGAGCA TGGAAGGCCT TACAAACGCC 
ACCAATAACC AGCAGATGAT CAATGCCACG TCTTACATAG GCAAGCAGGT TACTGTCAGT 
GGTAATACCA TCGGCAAGGT CACCGACGAA ACCACCAAGG AATCTACCAT TACGCGCTTC 
CGGTACGCCC CTGCGGACAA TACCGTGGGC GGAACCATCA CAGTACGCGA TGCCGACAAT 
AACGTCGTAT ACGTTGAAGA AGTCAGCCCC AAAAATAAGG GAACCACATA CGAATTTTTG 
TGGAACGGCA AGGCTACTGA CGGAACTGTT GCTGGCGATG GCGTCTATAC GGTCAACCTT 
GTGTTGCGCG ATTCCAATGG CGATGCGGTT CTTTCTGACC AGGTAGTGGA CGCCAAGGTT 
ACCGGCGTGG TCAACGACGG CGGCGTGGTC TATCTCGGTC TTGAGGGCGG CCAGCTCATG 
CCGCTTGCCA ATGTGCGGCA GGTTGCTGAA CCTGCCACCG TTGCCGCCAA GCCGGACGAC 
AAGGACAAGG AAGAAGGCGA AGACAAGGAA TCTGAAGACG ACAAGGACGA GGAACAGCCC 
GAATCCCGTG CAAGCGCGAT GAGTATTGGT GATGTCAATA TCAGCAATAT CAACTTTAGC 
GGCAGACTTT TTTAA
 
Protein sequence
MSSITQSLNR TNNEFNTALS KQKGSNLDKD SFMLLLVTQF KYQDPLNPME DKEFIAQMAQ 
FSSLEQLMNL NTSMEGLTNA TNNQQMINAT SYIGKQVTVS GNTIGKVTDE TTKESTITRF 
RYAPADNTVG GTITVRDADN NVVYVEEVSP KNKGTTYEFL WNGKATDGTV AGDGVYTVNL 
VLRDSNGDAV LSDQVVDAKV TGVVNDGGVV YLGLEGGQLM PLANVRQVAE PATVAAKPDD 
KDKEEGEDKE SEDDKDEEQP ESRASAMSIG DVNISNINFS GRLF