Gene Ddes_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1258 
Symbol 
ID7284943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1478173 
End bp1479588 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content59% 
IMG OID643582057 
Productglycosyl transferase family 9 
Protein accessionYP_002479839 
Protein GI220904527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG ACCCTGTTCT GGTTCTCCAG ATGCACCGCA TGGGAGACCT GATTCTCACC 
ATGCCCCTGC TTCGCCTTCT TCTACGCCAC TGGGCCGGAC ACGAGGTGTG GGTTGCGGCT
GAACCGCACT TTTTTCAGGA TATCATGCCA CTGGCCCCCA ATGTTGTTTT TTTTCCTCCT
ACCCACTGTC ACGCCCTGGG ACAACGCCAT TATGAACTGG CACTGAACCT GAGCAGCCGT
CCACAGGCCC TCATCTGCCA GGCAAAACTG AAGGCAAGGC ACAAACTTGG TCCGGAAGCC
ATCTCAACCG GCACACTGCC GGGGCATCAA CACATCAACG GTTACTGGCA ACTCTACCGC
GCCGCATTAA CCCACAACAA CCGTAACAAT GCTTTTCACT GGTCCGACCT GTATATGCTG
GACCTTTCGC CGCAACCCGA TCTTACTGGT GTGCTCCGAC CATTTCCCCG CCCGGCGGGA
ACAGGCCGTA TCGGCATGGT TCTCGGGGCC AGCGAGTTTG CCAAACGCCC AGATGCGGAC
TTCTGGGCAC GGCTGGCGCG GCGGCTGGCC GGCGAAGGAA TGTTGCCGCT GTTTCTGGGT
GGCCCGGCGG AACAGAGCCT GGGGCAGGAG GTCGCCCAAA AATCCGGGCT ACCGGGGGCC
AATCTTTGCG GGCGTCTCTC GCTCAAAGAG CTGGCTGCCC TCATGCGCAC TTTGGACCTG
TGCGTGACAC CAGACACAGG TCCCATGCAT CTAGCCGACT TTGTGGGGGT GCCAGTACTC
AATCTTTCCA TGGGGCCAGT TCATGCCAGG GAGACAGGGC CGTCCGCTCC CGGGCAGCAT
GTTTTGCGAG CAGCCATGAG TTGCGTGGGA TGTTGGCAAT GTCACCGTGG ACGGCTTTAC
TGCAAGCAGG CATTTACAGC CTCTGGGGTT GCCAGGCTGA TCCTGAGCCT TTTACACACG
CCTGACCACC CGATAGTGCC ATCGGGCCTG CGGCTATACC GTACCGGGCG CGATGCTCTG
GGACTGTATA CCCTCGAGCA TGTGGGCTGC AGAGCAGATA CAAGCTGCCG TCCTCTGATT
GAGGGCCTCT GGCAGGCCGT TTTTCTCTTT TTTTACAGCC CTGTGCAGCG CCCCTTGCTG
ATCAGCAGAC TGGAAGGCCT GCGCGTGGCT TTTCCCCACA TGGCTGAAAG TGTGGCGGCC
GGACTTGCCG CGCTTTGTGC CAGTTTTTCA CGCTATCTCA GGCAGGGCGC ACGCATGTTG
CCTGATGACT TCTGGCGCTC CCAGCCCCCC GTAATCCGCC TTTTCAGCGG ATATTTGCAC
ATGCACATGC AAAATGACGA TTACTCCCCG AAAGCATGGA GCATGGCGCT TGAGCGTCTG
GAAGAAATCA GCGCCCTGTT CATGAACCAT TCCTGA
 
Protein sequence
MSADPVLVLQ MHRMGDLILT MPLLRLLLRH WAGHEVWVAA EPHFFQDIMP LAPNVVFFPP 
THCHALGQRH YELALNLSSR PQALICQAKL KARHKLGPEA ISTGTLPGHQ HINGYWQLYR
AALTHNNRNN AFHWSDLYML DLSPQPDLTG VLRPFPRPAG TGRIGMVLGA SEFAKRPDAD
FWARLARRLA GEGMLPLFLG GPAEQSLGQE VAQKSGLPGA NLCGRLSLKE LAALMRTLDL
CVTPDTGPMH LADFVGVPVL NLSMGPVHAR ETGPSAPGQH VLRAAMSCVG CWQCHRGRLY
CKQAFTASGV ARLILSLLHT PDHPIVPSGL RLYRTGRDAL GLYTLEHVGC RADTSCRPLI
EGLWQAVFLF FYSPVQRPLL ISRLEGLRVA FPHMAESVAA GLAALCASFS RYLRQGARML
PDDFWRSQPP VIRLFSGYLH MHMQNDDYSP KAWSMALERL EEISALFMNH S