Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1258 |
Symbol | |
ID | 7284943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1478173 |
End bp | 1479588 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643582057 |
Product | glycosyl transferase family 9 |
Protein accession | YP_002479839 |
Protein GI | 220904527 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGG ACCCTGTTCT GGTTCTCCAG ATGCACCGCA TGGGAGACCT GATTCTCACC ATGCCCCTGC TTCGCCTTCT TCTACGCCAC TGGGCCGGAC ACGAGGTGTG GGTTGCGGCT GAACCGCACT TTTTTCAGGA TATCATGCCA CTGGCCCCCA ATGTTGTTTT TTTTCCTCCT ACCCACTGTC ACGCCCTGGG ACAACGCCAT TATGAACTGG CACTGAACCT GAGCAGCCGT CCACAGGCCC TCATCTGCCA GGCAAAACTG AAGGCAAGGC ACAAACTTGG TCCGGAAGCC ATCTCAACCG GCACACTGCC GGGGCATCAA CACATCAACG GTTACTGGCA ACTCTACCGC GCCGCATTAA CCCACAACAA CCGTAACAAT GCTTTTCACT GGTCCGACCT GTATATGCTG GACCTTTCGC CGCAACCCGA TCTTACTGGT GTGCTCCGAC CATTTCCCCG CCCGGCGGGA ACAGGCCGTA TCGGCATGGT TCTCGGGGCC AGCGAGTTTG CCAAACGCCC AGATGCGGAC TTCTGGGCAC GGCTGGCGCG GCGGCTGGCC GGCGAAGGAA TGTTGCCGCT GTTTCTGGGT GGCCCGGCGG AACAGAGCCT GGGGCAGGAG GTCGCCCAAA AATCCGGGCT ACCGGGGGCC AATCTTTGCG GGCGTCTCTC GCTCAAAGAG CTGGCTGCCC TCATGCGCAC TTTGGACCTG TGCGTGACAC CAGACACAGG TCCCATGCAT CTAGCCGACT TTGTGGGGGT GCCAGTACTC AATCTTTCCA TGGGGCCAGT TCATGCCAGG GAGACAGGGC CGTCCGCTCC CGGGCAGCAT GTTTTGCGAG CAGCCATGAG TTGCGTGGGA TGTTGGCAAT GTCACCGTGG ACGGCTTTAC TGCAAGCAGG CATTTACAGC CTCTGGGGTT GCCAGGCTGA TCCTGAGCCT TTTACACACG CCTGACCACC CGATAGTGCC ATCGGGCCTG CGGCTATACC GTACCGGGCG CGATGCTCTG GGACTGTATA CCCTCGAGCA TGTGGGCTGC AGAGCAGATA CAAGCTGCCG TCCTCTGATT GAGGGCCTCT GGCAGGCCGT TTTTCTCTTT TTTTACAGCC CTGTGCAGCG CCCCTTGCTG ATCAGCAGAC TGGAAGGCCT GCGCGTGGCT TTTCCCCACA TGGCTGAAAG TGTGGCGGCC GGACTTGCCG CGCTTTGTGC CAGTTTTTCA CGCTATCTCA GGCAGGGCGC ACGCATGTTG CCTGATGACT TCTGGCGCTC CCAGCCCCCC GTAATCCGCC TTTTCAGCGG ATATTTGCAC ATGCACATGC AAAATGACGA TTACTCCCCG AAAGCATGGA GCATGGCGCT TGAGCGTCTG GAAGAAATCA GCGCCCTGTT CATGAACCAT TCCTGA
|
Protein sequence | MSADPVLVLQ MHRMGDLILT MPLLRLLLRH WAGHEVWVAA EPHFFQDIMP LAPNVVFFPP THCHALGQRH YELALNLSSR PQALICQAKL KARHKLGPEA ISTGTLPGHQ HINGYWQLYR AALTHNNRNN AFHWSDLYML DLSPQPDLTG VLRPFPRPAG TGRIGMVLGA SEFAKRPDAD FWARLARRLA GEGMLPLFLG GPAEQSLGQE VAQKSGLPGA NLCGRLSLKE LAALMRTLDL CVTPDTGPMH LADFVGVPVL NLSMGPVHAR ETGPSAPGQH VLRAAMSCVG CWQCHRGRLY CKQAFTASGV ARLILSLLHT PDHPIVPSGL RLYRTGRDAL GLYTLEHVGC RADTSCRPLI EGLWQAVFLF FYSPVQRPLL ISRLEGLRVA FPHMAESVAA GLAALCASFS RYLRQGARML PDDFWRSQPP VIRLFSGYLH MHMQNDDYSP KAWSMALERL EEISALFMNH S
|
| |