| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1252 |
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| Symbol | |
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| ID | 7284937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1471325 |
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| End bp | 1472587 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582051 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_002479833 |
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| Protein GI | 220904521 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA CTTCCGTGCC CCCCAGAGGG CAGCCCGTAA AGCCATGGGC CATACTGCTG
GCCGCCGGAC AGGGCCATCG CCTTGCCGCC GCCACGGGCG GGCTTGCCAA GCAGTTTCTG
CACTGGCAGG GAATGCCCCT GTATTGGCAC GCCGCCAGAG CCATGAGCCG CAGCGCGGCG
GTGGCGGGCA TTGTTTTTGT TTTTCCCCCT GCCGATTATG ACGCACATGC AGAAAATCTG
CGCGCTCTTT ATGCTGCTGG TGATTTGGGG TTGCCCTGCC TTACAGCAGT CGGCGGAGCA
CTGCGCCAGG ACTCCGTACG TCACGGGCTG GCCGCTTTGC CCGCAGATGT GAGCCATGTG
CTTATTCATG ATGCGGCCCG GCCTTTTGTC AGCCCGGCGT TGATACGCAA GATATGTGCG
TCCCTTGAAT CCGGTGTACC GGGAGCAATC CCGGCCCTGC CGGTAACAGA TACCATAAAG
ACTGTGTCAC ATGACCTGGT TACAGGCACC TTGCCTCGCC ATACGCTCAG GGCAGTCCAG
ACGCCTCAGG GCTTCCGTCT TGACCTTCTG CTTCAGGCCC ATTGCCATGC GGAAAAACAG
AAACTGAACG TCACTGACGA TGCTTCCCTG CTGGAAGAGA TGGGGTGTGA GATCCACGTG
GTTGAAGGAG AAGCCGCCAA CGTGAAAATT ACCAACCCAG AGGATATGGA TCTTTTGCGC
CCCCCCCATG CCCTGCCCCG CCCTTGCACG GGCATGGGCT ACGATGTTCA TCGCTACGCT
CCGGGCGGCC GCCCCATGCG GCTTGGCGGC GTGCTCATTC CCGCCGGGCC TGAGGTGGCC
GCACATTCCG ATGGCGATGT GCTGCTGCAT GCTCTGACCG ATGCAATACT CGGCTGTGCC
GGTCTCGGCG ATATAGGTCA GCACTTTTCT GATAAAGATC CCCGCTTTGA TAATATTTCT
TCAGCGCTCC TGCTGGACGA AGTTCTGGAT ATGGTGCGCA AAAAAGGTGT GCAGTTGTGT
CACGCCGACC TTACCCTAAT TGCCCAGACG CCCCGTCTCG CGCCACACCG CGAAGAAATC
AGAAAAAACA TAGCCCGCCT GCTGGCTTTG CCCGCTGACT GCGTCAACCT TAAAGCCAGC
ACAGAGGAAG GGCTTGGATT CACAGGCCGC GCCGAAGGCA TCAAGGCATA CGCCGTTGTC
ACAGCGTGGG CAGGCGCCCG CGCGGCCTTT GCGCCGCCGT CTTTTTTGCA ACGCGACATC
TGA
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| Protein sequence | MPETSVPPRG QPVKPWAILL AAGQGHRLAA ATGGLAKQFL HWQGMPLYWH AARAMSRSAA
VAGIVFVFPP ADYDAHAENL RALYAAGDLG LPCLTAVGGA LRQDSVRHGL AALPADVSHV
LIHDAARPFV SPALIRKICA SLESGVPGAI PALPVTDTIK TVSHDLVTGT LPRHTLRAVQ
TPQGFRLDLL LQAHCHAEKQ KLNVTDDASL LEEMGCEIHV VEGEAANVKI TNPEDMDLLR
PPHALPRPCT GMGYDVHRYA PGGRPMRLGG VLIPAGPEVA AHSDGDVLLH ALTDAILGCA
GLGDIGQHFS DKDPRFDNIS SALLLDEVLD MVRKKGVQLC HADLTLIAQT PRLAPHREEI
RKNIARLLAL PADCVNLKAS TEEGLGFTGR AEGIKAYAVV TAWAGARAAF APPSFLQRDI
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