Gene Ddes_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1243 
Symbol 
ID7284926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1457247 
End bp1458158 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content58% 
IMG OID643582041 
Productferredoxin 
Protein accessionYP_002479824 
Protein GI220904512 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTTG TATCGATTTT GACCCTTTTT GCCCTGGGCC TTGTGGCATC CATCATCCTG 
GCCGTGGCCT CGCGGGTTTT TTATGTCAAG GAAGACCCGC GGGTTGAAGC CATAATGGAA
GCCCTGCCGG GAGCAAACTG CGGTGGATGC GGTTTTGCCG GGTGTGAAGG ATACGCCGTT
GCAGTGCTCA ACGATCCGAA CATTGCGGCA AACAAATGCT GTGCGGGGGG GCCGGAAGTA
AGCATCGCCG TGGGCGAACT CACCGGCAAA ACCGTGGCCG AAGCCGAACC GTTGTACGCC
CTGCGCCGCT GTGACAAGCA GGCTGGCCAA GTTGGCGCGC GCTATGAATA TCAGGGGCTG
CCCTCGTGCG CCGCGGCTTC GCTCATGCGG GGCGGCACTG ACTGTTGTGC CTTTTCCTGT
ATAGGGTACG GCGACTGTGT GCAGGCCTGC CCGTTCAATG CCATGCGTAT TGTCAACGGA
CTTGTGGAAG TTGACCAGGA TAAATGTACT GGTTGTGGTA CTTGTGTAAA CGTGTGCCCG
CGCGGGGTTC TGGAAATGAC GCCTCTACGG GCCAGAGTTG CTGTTTACTG CAATACTCGT
GAAAAACTGC GGGCAGTTTC TGATGTATGC AAAGTAGGCT GCATCAAGTG CCTAAAATGC
GTGAAAGCCT GCCCGGCCAA GGCGGTAAGC ATGGTCGATG ACCGCATAGA AATAGACCAC
CTGCTTTGTC TTTCCTATGG CCCGGCCTGC CAAGAAGCGT GCGTATCCTC CTGCCCCAGG
CACATCTTTA GATATACCAG GCCGATTCAG GCTGTGGGGT GTGACGAGTC AGGCTGCAGT
GAGCCGGCGC ACACACCCCT TTCGGCTCCT GTACCTGATC AGAACGTCTC CCAGGCGCAG
CCTGGGGCCT GA
 
Protein sequence
MVFVSILTLF ALGLVASIIL AVASRVFYVK EDPRVEAIME ALPGANCGGC GFAGCEGYAV 
AVLNDPNIAA NKCCAGGPEV SIAVGELTGK TVAEAEPLYA LRRCDKQAGQ VGARYEYQGL
PSCAAASLMR GGTDCCAFSC IGYGDCVQAC PFNAMRIVNG LVEVDQDKCT GCGTCVNVCP
RGVLEMTPLR ARVAVYCNTR EKLRAVSDVC KVGCIKCLKC VKACPAKAVS MVDDRIEIDH
LLCLSYGPAC QEACVSSCPR HIFRYTRPIQ AVGCDESGCS EPAHTPLSAP VPDQNVSQAQ
PGA