Gene Ddes_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1241 
Symbol 
ID7284924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1455753 
End bp1456430 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID643582039 
Productelectron transport complex RsxE subunit 
Protein accessionYP_002479822 
Protein GI220904510 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAC TACAAGAATT TACCAAAGGG CTTTGGAAAG AACTGCCGCC ATTCCGTCTG 
GTGCTGGGGC TTTGCCCCAC CTTGGCCGTA ACCAACTCTG CCGACAATGG TCTTGGCATG
GGAGTGGCCG TCATTTTTGT GCTTGTACTT TCCAACATGC TCATTTCAAT GGTACGCAGC
ATTATCCCCA AAACAGTACG TATCGCCTGT TTTATTGTCA TTGCGGCTTC ACTGGTGGTC
GCGGTGGAAC TGCTCATGCA GGCATATGCC TACCCTCTGT ACCAGAGACT GGGCATCTTT
GTGCCGCTTA TCGTGGTCAA CTGCATAATT CTCGGCCGGG CCGAAGCCTT TGCAGCCAAA
AATGGCGTGG CAGCTTCCAT TGCTGATGGG CTGGGCATGG GGCTAGGTTT CACCCTGTCG
CTGACCTTTC TTGGCTCGTT GCGCGAAATT TTTGGCAACG GAACATGGTT TGGACAGAGC
GTCATGTGGG AAGGCTTTGA GCCCATGCGC ATCATGATTC AAGCGCCGGG GGCCTTTATT
TGTCTCGGCC TCATACTGGC GGCCATGAAC ATGTACAACT ACTGGAAAGC CGGCAGAGGC
AAGGCCGTGC CCGCCCCGCA GGGCGGTTGC GGTTCCTGCG GGTGCTGCTC GCTGGAACGG
CGTGAAGAAG CCCGGTAA
 
Protein sequence
MSILQEFTKG LWKELPPFRL VLGLCPTLAV TNSADNGLGM GVAVIFVLVL SNMLISMVRS 
IIPKTVRIAC FIVIAASLVV AVELLMQAYA YPLYQRLGIF VPLIVVNCII LGRAEAFAAK
NGVAASIADG LGMGLGFTLS LTFLGSLREI FGNGTWFGQS VMWEGFEPMR IMIQAPGAFI
CLGLILAAMN MYNYWKAGRG KAVPAPQGGC GSCGCCSLER REEAR