| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1238 |
|---|
| Symbol | |
|---|
| ID | 7284921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1452870 |
|---|
| End bp | 1454189 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643582036 |
|---|
| Product | Respiratory-chain NADH dehydrogenase domain 51 kDa subunit |
|---|
| Protein accession | YP_002479819 |
|---|
| Protein GI | 220904507 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC TTTTTCAGGT AATCAATGAC CCCCGGTTTC ACCTGCTTTA CGGGGTGACG
CAACGCTTCA GCCCGGGACC ACAACCGGAC AGGGTGCGGC TCAACCGCGA AAACTGCAAG
CTGGTTGATG GCGTTACAAA AAAAGCGCTT GTCTACCCTT ACAAGCTTCT GGCCGAACAT
TCTTCGCCCT TGAAAGGCGA TCTGTTTTCG CCAGTTTATG GCAAGATCAG TGAAGTAAGC
CAAAGCAGTA TTTTTATTGA CGCCATTGAA CCGGATGATG AATTGCGCCA GGCCGCAGAA
GCCGTACAGA AAACCGACCT GCTCGCCGCT CCTCAGCGGG GTGAAGAGTT GCGGCCATTG
CTCAAAAGTA TGGGGCTGAA CACCAGATCG CTGGGGCAGC CCTGCGACAC GCTTATTATC
AACGGCCTTA ATCCGGATCC GGGCGTGACC TGGGCTGAAC CCATGCTGCT GGCACATCAG
GAAACCCTGC GTGATGGCCT TGAAATGCTA CGCCGTCTCT CACCCGCCAA ACGAATCTTG
CTGGCGGTGC CCAAGGAAAT GCGCCTGCAT CACAACGACA TTGAGGTGGT GCACGTGCCT
TCGCAGTATC CGGCCAGCGT TAACGCCCTT GTCATCAAGG CTGTGACCGG GCAGGAAAAC
CCCAAGGGCG TCGGTATAGT AGGCCTGCAC AATATCTGGA GCCTGGGGCG GATAGCCCGA
ACCTGTCTGC CCCTTGTGGA GAGTGTCGTC ACTATTGGCA ACTGCGAATA TTCGGGGAAC
TATATCGTAA AAGACGGCAG CCTGATCGGC CAGCTGCTTG AATTCTCGCA CATCACTCTG
CGCAATGGCG ACACGCTTGT CCGGGGAGGC CCCTTGCGGG GTGAAAGCCT GGAAAAGCTT
GATCGTAGTG TTACCCGCGG TTCAACAGGA GTTTTTGTTG TCGAGGCAGG CACTATTCCT
CCCATGAAAG GACACAGCCC CTGCGTGAAC TGTGGAGCCT GTGTGCTGAT CTGCCCTGCC
CGGCTCAGCC CGAGCATTTT GAGCCGCAAT GCCGAGTTTG CCCTGCACGA GCGCAATCTG
GATGAACACA TCGGCTCCTG TCTTGAATGC GGCCTGTGCG GCTATGTCTG CATTGCCCGC
AGGCCGGTCC TGCAATATAT CCGTCTGTCC AAATTCAAAT TGGCGGAAGC CGCCGCAGCC
AGGGGAAAAG CACTGGATGC GGATGACGCA CTGGGCATGA TCGTCGCCGA CAATGCCGAG
GCTTCAGCCG AAGCCGAAAA CAATAACAGG GCTGCCCGTG AGCAGCGGGG AGGCAACTGA
|
|---|
| Protein sequence | MKELFQVIND PRFHLLYGVT QRFSPGPQPD RVRLNRENCK LVDGVTKKAL VYPYKLLAEH
SSPLKGDLFS PVYGKISEVS QSSIFIDAIE PDDELRQAAE AVQKTDLLAA PQRGEELRPL
LKSMGLNTRS LGQPCDTLII NGLNPDPGVT WAEPMLLAHQ ETLRDGLEML RRLSPAKRIL
LAVPKEMRLH HNDIEVVHVP SQYPASVNAL VIKAVTGQEN PKGVGIVGLH NIWSLGRIAR
TCLPLVESVV TIGNCEYSGN YIVKDGSLIG QLLEFSHITL RNGDTLVRGG PLRGESLEKL
DRSVTRGSTG VFVVEAGTIP PMKGHSPCVN CGACVLICPA RLSPSILSRN AEFALHERNL
DEHIGSCLEC GLCGYVCIAR RPVLQYIRLS KFKLAEAAAA RGKALDADDA LGMIVADNAE
ASAEAENNNR AAREQRGGN
|
|---|
| |