| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1233 |
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| Symbol | |
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| ID | 7284916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1446013 |
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| End bp | 1449495 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643582031 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002479814 |
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| Protein GI | 220904502 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT TTGTTCACCT GCATTGCCAT ACCGAGTACA GCCTGCTTGA CGGGGCCATT
CGCATCAAAG ACCTTTGCGC CCGCGCCAAG GATTTTGGCA TGCCTGCCTG CGCCATCACC
GACCACGGCA ACCTTTTTGG CGCTGCCTAT TTTTATCAGG GCTGCAAAGA TTTTGGTATT
AACCCCATTT TTGGTTGTGA GGTTTACGTT TGCCACGACC ATACAGACAA GAAAACGGAC
TCTCCCCTTG CCCGCAGGCG TCACCACCTT ATATTGCTGG CACAGAATAA AACCGGCTAT
CATAACCTGG TAAAACTTGT GAGCCACGGC TTTCTTGATG GTTTTTATTA CAAGCCGCGA
GTGGATAAAG GGCTTCTGCG CAAATATTCT GAAGGATTAA TCTGCCTTTC TGCCTGTATT
GCGGGTGAAA TCCCCCGGGC CATTCTGGCT GATGACATGG ATCTGGCCCG CAAGCTCACA
CACGAATACG CCGACATATA TCCGAACCGT TTTTATCTGG AACTTCAATC AAACGGACTT
AAAGAGCAGG AAAAAGCCAA TGCCGGGCTG ATCGATCTGG CTGAAACATG CAACCTGCCT
CTGGTAGCCA CCAACGACTG CCACTACCTT AACGCTGATG ACGCCGAGGC GCATGAGGTG
CTGCTCTGCA TACAAACGCA GACCACCATG GACGACCCCA AGCGCATGCA GTTCGGTACG
CACGAACTTT ATTACAAGTC GATAGAAGAA ATGGAAAAAT CTTTCGGCCA TGTGCCGGAA
GCTCTTGCCA ATACCGCGCG CATTGCCGAG GCCTGCAATG TGGAGCTGGA CTTTGGCAAC
CACTATTTCC CTGTCTATCA ACTTCCTGAA GGCGCCAGCA TGGAGTCCGA ATTTCGGCGC
CTTGCTGAAG AAGGTTTGGA AAAACGGCTC GTAAATCACC CCGATCGCGA TCAGCTGAAT
CCACAAACCT ACCGTGACCG CCTGCAATAC GAACTGCGTG TTATCCTGGA AATGGGCTTT
CCGAGCTATT TTCTTATCGT GCAGGAGTTC ATCAACTGGG CAAAAAATAA CGATATTCCC
GTGGGACCGG GGCGAGGGTC CGCAGCAGGG TCGCTGGTGG CCTGGGCCTT ACGCATTACC
AATCTTGACC CCATCCCCTA CAATCTTTTG TTCGAACGTT TTTTGAACAG TGAGCGCGTG
TCGCTGCCCG ATATCGACGT GGACTTCTGC GAACGTCGCC GGGGCGATGT CATCAAGCAC
ATGGTCGAGA CCTACGGTGA AGGTTCTGTG GCGCAAATCA CCACCTTCGG CACGATGAAA
GCCAAAGGCG TTGTGCGCGA CGTTGGGCGC GCTCTGGGTA TGAGCTTTGC CGAGACAGAC
CGTATCGCCA AACTGGTGCC GGCTGACCTC AAGATGACCA TTAAAAAGGC TCTTGAAAGT
GAACCGGAAC TGGAAAAATT GTATCTTGAA GACCAGCAGG TCAAGCATCT GCTTGATACG
GCGCGCCGCC TTGAAGGCCT GGCCCGCCAT GCCTCCACCC ACGCCGCCGG ACTTGTGGTC
TCAGACAAGC CCATGAAGGA ATATCTTCCT CTTTACCTCG GTAAACGTGG CGAACTTGTG
ACCCAGTTTG ACGGCCCCAT GACGGAAAAG GCGGGGCTGG TCAAATTTGA CTTTCTGGGC
CTCAAAACCA TGACACTTAT TCAGGACACC CTGGATAATA TAAGCCTTCA GGGGCAGGCC
CCGCCGAACC TCGACAATCT CCCCCTGACA GACGCCGAAA CGTATGAGCT TTATGCACGG
GGCGAAACCG ATGGCGTGTT TCAGGTAGAA AGTTCTGGCA TGCGACAATA CCTGCGCATG
CTCCGTCCTA CCTGCTTTGA AGATGTCATC GCCATGCTGG CGCTTTATCG GCCCGGCCCC
CTTGGTTCCG GTATGGTAGA CGAGTTTATC AAACGTAAAC ACGGGCAGGT TCCTGTCATC
TACCCGCACG AGTCTCTTAC CGACTGCCTG CGCGACACCT ACGGCGTTAT TGTCTATCAG
GAACAGGTCA TGCAGATCGC CCAGATCATC GCCAGCTATA CACTTGGCGG GGCTGACCTG
TTGCGACGCG CCATGGGCAA GAAAAAAGCC GAGGCCATGG CCAAGGAGCG CGTCACCTTT
GTGGCTGGAG CGCAAAAAAA TAATATCAGC GAAGAAAAAG CCAACGAAAT ATTCGACTTG
ATGGAAAAAT TTGCAGAATA TGGCTTCAAC AAGTCACATT CCGCCGCCTA TGCCCTTATT
TCCTATTATA CGGCCTACCT GAAGGTTCAC TACAAGGTCG AATTCATGGC TGCCCTGCTT
ACCTCTGAAA TGGGCAATCA GGACAAGCTG CTTAAATATG TTTCCTGCTG CAAAGACATG
GACATCGATG TGGTGCAACC TTCAGTAAAC CGTAGCCAGC GCGAGTTTAC AGCTCATGAA
GGCAAGGTTG TTTTCGGCCT TGGCGGCATC AAGAATGTGG GCGACGAAGC CATCCGCGAA
ATTGTAGAAG CCCGCCAGCA GGAAGAAGAA TTTGCCTCGC TTTTTGATCT GTGCTGCCGG
GTAAACCTGC GCAAAGTCAC CAAGCGCGTA CTGGAGTCCC TTATAAAAGG CGGAGCCTGC
GACTGCTTCG GCGTGGCACG GGCCGCCATG CTTGCCTCGC TGGACCTGGT GGTTGCCCGC
GCCCAGAGAA AGGCCAAAGA CAAAAGCTCC AATCAGGTAT CCCTGCTCGC CATGGCCCCT
GTGGCAGAAA GCGCTCCGCA GCCAGGCATC GGCATAGACT GCGCGGAAGC CGCCACGCCG
GAGATGGCAG ATGAAGACAA GTTGCGGGCC GAAAAAGACG CCCTGGGCTT CTTTCTTACG
AGCCACCCTT TGCAGCCTTA TGTGCGCGAA ATACGCCGTC TTGGTCTTAC AACGCTTGAA
GATGCGCGTG ACATGTTCCC CGGGGCTGAA GTGCGCTGCG CCGTGCTTGT GACCAGCGTG
CGGGAGGTTA TTACCAAAAG CAAGGGCGAG CGCATGGCGT TTGCAGCTGT CGAGGACCTT
ACCGGACATG CCGAGGTTAC TTTTTTTCCT CGCAGCTATG CAGAGATACG CCAGCTGCTG
CACTCGGAGC AGCCCCTGTG CCTGACTGCC CGTCTGGATA AAGAGTCGGG CGATAACCGC
GACCTTGACG ATGAAGGAGA AGAAGCCCCG CGTGAACTCA AGCTCCTGGG CCAGAGCCTG
CTGCTGATGG CCGAATGCTG CGGGCTGAAC GATACGCCGG TATGCGTACA GATTCCCCCG
CACCGGATGG GACGCGAAGA CATGCTGGCT CTGCGCAATA TTCTTGAGAG CTACCCCGGT
CCTGTAGAAA CCCACGCCCA GATATGCCTT GATGGACATG TCTGCCACCT GCATCTGGAC
AACGCCCTCA AGGTTTCTCC CGGCCCCGAC CTGGACAAAG CCCTTGCCGC CTGGGCTTCA
TGA
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| Protein sequence | MSDFVHLHCH TEYSLLDGAI RIKDLCARAK DFGMPACAIT DHGNLFGAAY FYQGCKDFGI
NPIFGCEVYV CHDHTDKKTD SPLARRRHHL ILLAQNKTGY HNLVKLVSHG FLDGFYYKPR
VDKGLLRKYS EGLICLSACI AGEIPRAILA DDMDLARKLT HEYADIYPNR FYLELQSNGL
KEQEKANAGL IDLAETCNLP LVATNDCHYL NADDAEAHEV LLCIQTQTTM DDPKRMQFGT
HELYYKSIEE MEKSFGHVPE ALANTARIAE ACNVELDFGN HYFPVYQLPE GASMESEFRR
LAEEGLEKRL VNHPDRDQLN PQTYRDRLQY ELRVILEMGF PSYFLIVQEF INWAKNNDIP
VGPGRGSAAG SLVAWALRIT NLDPIPYNLL FERFLNSERV SLPDIDVDFC ERRRGDVIKH
MVETYGEGSV AQITTFGTMK AKGVVRDVGR ALGMSFAETD RIAKLVPADL KMTIKKALES
EPELEKLYLE DQQVKHLLDT ARRLEGLARH ASTHAAGLVV SDKPMKEYLP LYLGKRGELV
TQFDGPMTEK AGLVKFDFLG LKTMTLIQDT LDNISLQGQA PPNLDNLPLT DAETYELYAR
GETDGVFQVE SSGMRQYLRM LRPTCFEDVI AMLALYRPGP LGSGMVDEFI KRKHGQVPVI
YPHESLTDCL RDTYGVIVYQ EQVMQIAQII ASYTLGGADL LRRAMGKKKA EAMAKERVTF
VAGAQKNNIS EEKANEIFDL MEKFAEYGFN KSHSAAYALI SYYTAYLKVH YKVEFMAALL
TSEMGNQDKL LKYVSCCKDM DIDVVQPSVN RSQREFTAHE GKVVFGLGGI KNVGDEAIRE
IVEARQQEEE FASLFDLCCR VNLRKVTKRV LESLIKGGAC DCFGVARAAM LASLDLVVAR
AQRKAKDKSS NQVSLLAMAP VAESAPQPGI GIDCAEAATP EMADEDKLRA EKDALGFFLT
SHPLQPYVRE IRRLGLTTLE DARDMFPGAE VRCAVLVTSV REVITKSKGE RMAFAAVEDL
TGHAEVTFFP RSYAEIRQLL HSEQPLCLTA RLDKESGDNR DLDDEGEEAP RELKLLGQSL
LLMAECCGLN DTPVCVQIPP HRMGREDMLA LRNILESYPG PVETHAQICL DGHVCHLHLD
NALKVSPGPD LDKALAAWAS
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