Gene Ddes_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1229 
Symbol 
ID7284911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1441887 
End bp1443095 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content56% 
IMG OID643582027 
Productintegrase family protein 
Protein accessionYP_002479810 
Protein GI220904498 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCCAA CGAACAAGCT CACCGAAATA AAAATCAGGA ATATCAAGCC CAACGGCAAG 
ATTGAACGCT TTGTCGATGG GGAGGGGTTG TACCTCGAAA CCTCTGTTGC CGGGGGCAAA 
CACTGGCGCA TGAAGTACCG GGTGAACGGC AAGGAAAAAC GCCTTTCCTT CGGGCCGTGG 
CCGGATATTT CGCTGAAAGA AGCCCGTGAG ATGCGGGATG AGGCAAAGAG GCAGTTACGG 
GAAAGCCTTG ACCCCTCAGC GGAAAAGAAA AAAGCCAAGC AGGAACAAGC AGCCCCTACG 
TTCCGTGACA TTGCTCTGGA GTATGTTGAG CACCAGCGTA GTGTCTGGGC CGCCAGTCAT 
ACCCGCACCG TTGAGGGGCG GCTGGCGCTG GACGTATACC CCGCTTTTGG CGCAAAGCCC 
ATTGCTGCCG TTACCCCTCA GGATATTCTC GCCATGCTCC GCAAAATTGA GGAGCGCCGT 
GCCTTCGAGA CCGCAAGCCG GGTCCTCGGT TTCTGCTCTC TCATTTTCAA ATACGCGGTG 
ACGCTCGGCC TTGTAGAAGC CGATCCATGC CGCGACCTTC GCCCCGCCTT GAAGCCCTAT 
GCCAAGGGCC AACTTGCCGC CATCACCAAG CCCAAGGAAG TCGGCGCGCT CATGCGGGCC 
ATTGATGACT ACAAGGGCAG TGTTGTGGTG CGGGCTGCTC TGCTCTTTTC TGCGCTCACC 
TTTTGTCGGC CCGGAGAAAT CCGCCATGTG GAATGGGCTG AAATAAATTT TGAACGCGAA 
GAATGGACTA TCCCCGCTGA AAAAATGAAA GGCCGGACGG AACACCGGGT TCCTCTTTCA 
CGCCAAGCCC TTGAGGTTTT GCACGGTATT ATGCCCTACA CAGGTTCCGC CAAGTACGTC 
TTCCCCACGC CGCGCAGCAA TAACAGGCCG CTTTCTGAAA ACGGCGTTTT GTCGGCCCTG 
CGAAACATGG GGTACACCAA GGAACAAATG ACCGCCCACG GTTTCCGCTC GATGGCTTCC 
ACACTGCTCA ACGAGCTTGG GCACAGACCG GACGCCATTG AAGCCCAGCT TGCCCATAAG 
GGCGCGGATA AAATTCGGGC TACATATAAC CGCGCTGAGT ATATGAAGGA ACGCCGCAAC 
CTCATGCAAG CGTGGGCTGA TTACTTAGAA GATTTAAAGA TGCAGTCAAT GCAGCCGGGG 
CAAATATGA
 
Protein sequence
MPPTNKLTEI KIRNIKPNGK IERFVDGEGL YLETSVAGGK HWRMKYRVNG KEKRLSFGPW 
PDISLKEARE MRDEAKRQLR ESLDPSAEKK KAKQEQAAPT FRDIALEYVE HQRSVWAASH 
TRTVEGRLAL DVYPAFGAKP IAAVTPQDIL AMLRKIEERR AFETASRVLG FCSLIFKYAV 
TLGLVEADPC RDLRPALKPY AKGQLAAITK PKEVGALMRA IDDYKGSVVV RAALLFSALT 
FCRPGEIRHV EWAEINFERE EWTIPAEKMK GRTEHRVPLS RQALEVLHGI MPYTGSAKYV 
FPTPRSNNRP LSENGVLSAL RNMGYTKEQM TAHGFRSMAS TLLNELGHRP DAIEAQLAHK 
GADKIRATYN RAEYMKERRN LMQAWADYLE DLKMQSMQPG QI