| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1208 |
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| Symbol | |
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| ID | 7284890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1421061 |
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| End bp | 1422488 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643582007 |
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| Product | protease Do |
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| Protein accession | YP_002479790 |
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| Protein GI | 220904478 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0118678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATAA AAAAATGCCT TTCGGGCCTG CTCGCAGTGA CTTTTGTCGT TGCCGCGCAG
TTTGCCCAGG CAGGAAACCT GCCGGATTTC AGCGAGCTGG CAGCCAAAAG CGGCCCCGCT
GTGGTCAATA TCAACACTGA AAAAATGGCT GCCAGCGGCG GCTCTGAAGA GTTTTTTGGC
GAGATGTTCC GTAATATGCC CCCTGGGTTT GAAAAATTTT TTGACCAGTT CGGCGGCAAG
CGGGACGGCA AGCGCCCCCA GTCCAGACAA AAATCGCTCG GCTCCGGTTT TCTGGTATCG
GCGGATGGCT TTATCGTCAC CAACAACCAT GTGGTGGCCG ATGCTGACGT TATTCGCGTA
ACGCTGGATC AGGAGAACGG CAAGAGCGAA TCCTTCACGG CGACCCTTAT CGGCGCTGAT
GAAGAAACCG ACCTGGCTCT GCTGAAAGTG GAAACCAAAA AGAATCTGCC TTTTCTGGTT
TTCGGCAATT CCGACGAACT CAAGGTGGGC GAGTGGCTGC TGGCCATCGG CAATCCCTTT
GGCTTGGACC ACACGGTGAC CGCGGGTATT CTGTCGGCCA AAAACCGCAA CATTCATGCC
GGTCCCTTTG ACAACTTTCT TCAGACTGAT GCCTCCATCA ACCCCGGAAA CAGCGGCGGA
CCTCTGCTGA ACATGCAGGG GCAGGTGGTA GGCATCAATA CGGCCATCAT TGCCAGCGGG
CAGGGCATTG GTTTCGCAAT ACCCAGCAAC ATGGCTGCCA AGATCATTGA TCAGATCAAA
AGCGGCAAAA AAGTCAGCCG TGGCTGGATT GGCGTTACCA TCCAGGATGT TGAAGAAAAT
ACCGCAAAGG CCTTGGGCAT GAAAGACGCC AAGGGCGCGC TTGTGGGCAG CGTTATGGAA
AATGAACCTG CCGGCAAGGG CGGCATGAAA GACGGCGACA TCATCCTGGC TGTAGATGGA
AAGGATATTG ATGACGCGTC GGCCCTGCTG CGTGCCATTG CCGAAAAGAC CCCCGGCAGT
AAAGCCGTAA TCAAGGTATG GCGCGATGGA AAGGTTCTTG ACCTTACAGT CACCTTGGGT
GAGCGTCAGT CAACTTCTCA GGCCTCTGCA TCTGGAAAGG GCGGTCCCAA ACAAAACGAA
GGCCTCCTTG GCATCGCTGT GCGACCTCTC AATGATACCG AACGCCGGGA TATGAAGATT
GATAAAAATG AAGGCCTGCT TATTGTGGAT GTCACCCCCA GCAAACCTGC GGCCGAAGCT
GACTTGCGCC CCGGTGACGT AATCCTCAAG GCAAACCTCA AGCCTGTGAA TACGTCAGAG
GCATTGTCAA AAATTGTTAA TGAAGAGGGC GCAAAGCGTG GGGCCATCAT GCTGCAGATT
TCGCGCCGCG GCGACGTGTA TTTCCGCACA ATTCCTTTGA GCAAATAA
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| Protein sequence | MFIKKCLSGL LAVTFVVAAQ FAQAGNLPDF SELAAKSGPA VVNINTEKMA ASGGSEEFFG
EMFRNMPPGF EKFFDQFGGK RDGKRPQSRQ KSLGSGFLVS ADGFIVTNNH VVADADVIRV
TLDQENGKSE SFTATLIGAD EETDLALLKV ETKKNLPFLV FGNSDELKVG EWLLAIGNPF
GLDHTVTAGI LSAKNRNIHA GPFDNFLQTD ASINPGNSGG PLLNMQGQVV GINTAIIASG
QGIGFAIPSN MAAKIIDQIK SGKKVSRGWI GVTIQDVEEN TAKALGMKDA KGALVGSVME
NEPAGKGGMK DGDIILAVDG KDIDDASALL RAIAEKTPGS KAVIKVWRDG KVLDLTVTLG
ERQSTSQASA SGKGGPKQNE GLLGIAVRPL NDTERRDMKI DKNEGLLIVD VTPSKPAAEA
DLRPGDVILK ANLKPVNTSE ALSKIVNEEG AKRGAIMLQI SRRGDVYFRT IPLSK
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