Gene Ddes_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1155 
Symbol 
ID7284837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1363153 
End bp1364259 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID643581954 
Productputative glutamate synthase, large subunit (domain 1) 
Protein accessionYP_002479737 
Protein GI220904425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0067] Glutamate synthase domain 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.321075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAGAA TCGGTGCTAT CAAGAGCAGC ATGCCGGTAT CGCCCTCAGT GGCGCTCAAT 
CTTATGTTGC CACAGCAGGA AGGGCACGAC AATTCCGGCT TTGCCATGAT CATGCAGGAC
CTGGAGGGGG TGTTCAGCCA TTATAAAGAC AAGCCCCTGC TTTCTCTGGC CTGCACACCT
CAAGGTGTAC AGCTTGTCAA TGATTTTATG GAAAAAAAAG GTTTTGTGCA GGTCGCCCAG
TGGGTTCCTG ATGTAGACAG GCAGCCGGGC CTCAAGGTAG AGGCCATGCC CCGTTATATC
TTTAGAAATT ACGATTATCC GGAAATATAT CGCTATCGGA TGCAACAAGA CCGTGATGAT
CTGCTGCTTG ATACGCGGCT TGCGCTACGG GCCTTGCTGG CAAAGAACAA TGACGGCTTT
GTCTATTCCT TCTGGCCCGA TACGTTGACG CTGAAAGAAA TAGGCGACCC GGCAGATATC
GCCACCTACT TTCGCCTCTG GAATGATGAT GAGCGTCTGA CCGCCAAAAA TATTGTTGTC
CAGTGCCGCC AGAACACCAA TTATGACATT GTGCGGTATG CGGCTCATCC TTTTTTTATT
CAGGGCTATA CCGTTTGCGC CAATGGAGAG AATACTTTTT TTACCAGAAA CAAAGAACTT
CAGAGTGCAC TGCACAGGGG TTATGTCGGC TTTGAGTCTG ATTCGCAAAC CTTGCTGTAC
ACACTGCACT ATGTGCTGCA TGAGCTTGAG TGGCCCGTAA AATATTTCAA GCATGTCATC
ACGCCCCTGC CATTTACGGA GGCAGAGCAG CGCGCTGACG GCAAGGTGCT TGCCCTTATA
CGGGAATCAC TGGCGCATCT GGAAATCAAT GGCCCCAACG CCATCATCGC TCTTTTGCCT
GATGGGAACA TGATGACCTG CTGTGACTCA AAAAAATTGC GCCCCGTCGT TGTCGGCCGT
CACAAGCACA TGGTGGTCAT TGCTTCCGAG GTGTGCGGGC TTAACGCAAT TTTGCCCGAC
CGCGATGTGG CGGAAGATAT TTACCCGCAT GAGCGGGAGA TGGTGATAAT CGGCAATGAT
CTGGCGGTGC AGAGATGGAA TCAGTAA
 
Protein sequence
MCRIGAIKSS MPVSPSVALN LMLPQQEGHD NSGFAMIMQD LEGVFSHYKD KPLLSLACTP 
QGVQLVNDFM EKKGFVQVAQ WVPDVDRQPG LKVEAMPRYI FRNYDYPEIY RYRMQQDRDD
LLLDTRLALR ALLAKNNDGF VYSFWPDTLT LKEIGDPADI ATYFRLWNDD ERLTAKNIVV
QCRQNTNYDI VRYAAHPFFI QGYTVCANGE NTFFTRNKEL QSALHRGYVG FESDSQTLLY
TLHYVLHELE WPVKYFKHVI TPLPFTEAEQ RADGKVLALI RESLAHLEIN GPNAIIALLP
DGNMMTCCDS KKLRPVVVGR HKHMVVIASE VCGLNAILPD RDVAEDIYPH EREMVIIGND
LAVQRWNQ