Gene Ddes_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1152 
Symbol 
ID7284834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1357640 
End bp1358989 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content54% 
IMG OID643581951 
Productglutamate dehydrogenase 
Protein accessionYP_002479734 
Protein GI220904422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATG TACAGCGTGT AGTGAGCAAC CTTCAAGATA AATACGCCTA CGAACCTATC 
TTCCTGCAAG CTGTACAAGA GGTGCTACAA AGCCTACAGC CCGTGCTGGA TAAAAACCCC
CAGTACGAAC GCTACAAAAT ACTTGAGCGC ATTGTAGAGC CTGAGCGTAC CATATCATTT
CGCGTTCAAT GGATTGACGA TAAAGGGCAG ATTCAGGTTA ACAAAGGTTT TCGCGTTCAG
TATAACTCCG CCATTGGTCC CTACAAGGGC GGGCTGCGCT TTCACCCGAG TGTTAACCAG
GGTATTCTGA AATTTCTTGG CTTTGAGCAG ATATTCAAAA ACTCCCTCAC AGGTCTGGCC
ATAGGCGGCG GCAAAGGCGG CGCGGATTTT GACCCCAAGG GCAAATCCGA AACGGAAGTG
ATGCGCTTCT GCCAGGCATT TATGAGCGAG CTTTACCGCC ACATCGGAGC CACCATTGAC
GTTCCCGCCG GTGATATCGG AGTTGGCGGA CGCGAGGTAG GCTATCTTTT CGGCCAGTAC
AAACGCCTTA CCCAGAGCTA CGAAGGGGTG TTGACAGGAA AAAACCTTCT GTTCGGCGGC
TCCCTGGCCC GCACGGAAGC CACCGGCTAT GGTGCTGTAT ACTTTGCCCA GAGCATGCTT
GAGGGTAAGG GGCAAAGCCT CGAAGGTAAG AAGTGCGCTG TGTCTGGCGC AGGCAACGTA
GCTATCTACT GCTGTGAAAA ACTTTATCAG GTAGGGGCCA CCCCGCTTAC TGTTTCTGAT
TCACGCGGCA TGATCTATGA CCCTGAAGGC ATCAACATGG ATGTGCTCAA ACAAATCAAA
GAAGTTGAGC GCGAATCCCT GACCCGCTAC GTAGAACTGG TTTCTTCCGC GGTGTACACT
CCGGTTAATG AATACCCTGA CGGCCGCAAT GCCGTGTGGT CTGTTCCCTG CTATGCCGCA
TTTCCCTGCG CGACCCAGAA TGAGCTGAAC CTTGAAGACG CCAGAGTTCT GCTTGCCAAC
GGCTGCCAGT GCGTTGCCGA AGGGGCCAAT ATGCCCTCTA CCCTTGATGC GGTGCATGCC
TTCCTTAAAG CCGGCATCTG CTATGGCCCC GCCAAGGCCG CCAATGCCGG CGGCGTTGCC
ACCAGCCAGC TTGAAATGGC CCAGAACGCC AGCATGCAAA GCTGGTCTTT TGAAGCGGTG
GACAACAAGC TTCACGAGAT CATGCGTAAT ATTTATATGA GCGCCGCTGA AACGGCCAAA
GAATTCGGAG AACCCGGCAA CCTCGTGATG GGTGCCAATA TCGCCGGCTT CCGCAAGGTT
GCCAACGCCA TGGTGGCCCA GGGAGTATAA
 
Protein sequence
MSYVQRVVSN LQDKYAYEPI FLQAVQEVLQ SLQPVLDKNP QYERYKILER IVEPERTISF 
RVQWIDDKGQ IQVNKGFRVQ YNSAIGPYKG GLRFHPSVNQ GILKFLGFEQ IFKNSLTGLA
IGGGKGGADF DPKGKSETEV MRFCQAFMSE LYRHIGATID VPAGDIGVGG REVGYLFGQY
KRLTQSYEGV LTGKNLLFGG SLARTEATGY GAVYFAQSML EGKGQSLEGK KCAVSGAGNV
AIYCCEKLYQ VGATPLTVSD SRGMIYDPEG INMDVLKQIK EVERESLTRY VELVSSAVYT
PVNEYPDGRN AVWSVPCYAA FPCATQNELN LEDARVLLAN GCQCVAEGAN MPSTLDAVHA
FLKAGICYGP AKAANAGGVA TSQLEMAQNA SMQSWSFEAV DNKLHEIMRN IYMSAAETAK
EFGEPGNLVM GANIAGFRKV ANAMVAQGV