Gene Ddes_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1151 
Symbol 
ID7284833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1355973 
End bp1357199 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content53% 
IMG OID643581950 
Productaminotransferase class I and II 
Protein accessionYP_002479733 
Protein GI220904421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03542] LL-diaminopimelate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCG TAAACAGCAA TTTTCTCAAA CTCCAGAGCA ATTATCTTTT TGCGGACATC 
GCCCGTAAGG TTACGGCTTT TAAGAATGCC AACCCCGACA GGCGCGTGAT CAGCCTGGGC
ATAGGCGATG TTACACGTCC CTTGCCGCCT GCTGTCATCC AGGCTTTGCA CAAGGCCGTG
GATGAAATGG GTGATGCTAC GCTTTTTCGC GGATATGGTC CAGAACAGGG GTATGCTTTT
TTGCGTGACG TCATTATGCA GTATGACTAC AAGGTGCGTG GCGTTACCCT TGCCCCCGAC
GAAATATTCG TCAGCGATGG CGCGAAACCC GATGTGGGAA ATTTTCAGGA GCTTTTCGCT
CAGGACAGCA TCGTGGCAGT TACCGACCCG GTGTACCCGG TATATGTCGA CTCCAATGTT
ATGGCAGGGC GTTCGGGCGA AATAAAGGAC AGTCAGTGGA GCAGAATTGT CTATCTGCCG
TGCATAAAAG AAAATGACTT CGTGCCGGAC TTTCCTGCCG TCCGGCCGGA TATGATCTAT
CTTTGCTATC CCAATAATCC TACAGGCACG GTGCTTTCAC GTGCGGCTTT GCAAGGATGG
GTGGAGTACG CCAGACGCGA GGGTTGCGTT ATTCTGTATG ATTCCGCCTA TGAAGCTTTT
ATCACCGAAG CTGACATTCC TCACAGCATT TACGAAATTG ATGGTGCGGA AGAAGTTGCA
GTGGAGTTTC GCAGCTTTTC AAAAACTGCC GGATTTACCG GCCTGCGCTG CGCCTATACC
GTGGTACCCA AGGCTCTGCG CATCAGTGAC GGCAAGAGCG GCTCTGTAAG CCTGAACGCG
CTTTGGAATC GTCGTCAATG CACCAAGTAC AACGGTTGCC CCTATATTGT GCAGCGTGCC
GCCGAAGCCG TGTATAGCGA ACGGGGACAA AGTGAAATCA TGGGGATCAT TGCAGGTTAT
CAACGCAATG CCGCCATGTT GCGCACGGCG GCAAGTGAAA TGGGTTTTGC CGTATACGGT
GGCGTGAACG CTCCCTATAT CTGGTTACGT GTGCCTGACA ACACAGATTC CTGGGGATTT
TTTGACAGGC TGCTGCAGCA GGCAGGGCTG GTCTGCACTC CGGGCGCAGG TTTTGGCATT
TCGGGCGAGG GCTATGTGCG CCTGACGGCA TTCGGCTCGC CTGAAGATAC GGAAGAAGCC
ATACATAGGC TGCGCTCCCT GTGCTGA
 
Protein sequence
MATVNSNFLK LQSNYLFADI ARKVTAFKNA NPDRRVISLG IGDVTRPLPP AVIQALHKAV 
DEMGDATLFR GYGPEQGYAF LRDVIMQYDY KVRGVTLAPD EIFVSDGAKP DVGNFQELFA
QDSIVAVTDP VYPVYVDSNV MAGRSGEIKD SQWSRIVYLP CIKENDFVPD FPAVRPDMIY
LCYPNNPTGT VLSRAALQGW VEYARREGCV ILYDSAYEAF ITEADIPHSI YEIDGAEEVA
VEFRSFSKTA GFTGLRCAYT VVPKALRISD GKSGSVSLNA LWNRRQCTKY NGCPYIVQRA
AEAVYSERGQ SEIMGIIAGY QRNAAMLRTA ASEMGFAVYG GVNAPYIWLR VPDNTDSWGF
FDRLLQQAGL VCTPGAGFGI SGEGYVRLTA FGSPEDTEEA IHRLRSLC