Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1150 |
Symbol | |
ID | 7284832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1355089 |
End bp | 1355952 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643581949 |
Product | Diaminopimelate epimerase |
Protein accession | YP_002479732 |
Protein GI | 220904420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.756006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTGG CATTGCGCTT TACGAAGATG CAGGGCATCG GCAATGACTA TGTTTATATC AACGGCTTTC AAGAGCGTAT TGACAGCCCG GGAGAGCTCG CCAGAAAAAT CAGTGATCGG CATTTCGGCA TCGGGTCTGA CGGGCTTGTG CTTATTTTGC CATCAGCGAC GGCCGATGTG CGCATGCGTA TGTTCAATGC TGACGGCTCT GAATCGGAAA TGTGCGGCAA CGCAGTGCGT TGCGTGGGAA AATATGTTTA TGATCACGGC ATACAGGTCA AAGACGTTAT CACGGTAGAA ACCCGCGCGG GCGTCAAGAT TGTTCGCCTG CTGTTTGAAG CGGGAAAAGT TTGCGGTGCG ACTGTCGATA TGGGGGAACC TGAACTGCAT CCTGCCAGAA TTCCTGTACT CACCGAAACC TCCGGAGACG GCAGCCAGCA GCGTTTTGTG GCCCGCCCCG TGGACGTAAA CGGTCAACTA TACGAAATAA CAGCTGTATC GATGGGCAAT CCTCACGCCG TCATTTTTAT GAAGGGTATT GACGACCTTG ATCTTCCCCG TATCGGGCCG CGTTTTGAAC ATCACCCTTT GTTCCCAAAA CGCACCAATA CGGAGTTTGC GGAGGTCATC TCTTCCACCA AGGTGCGCAT GCGCGTTTGG GAGCGCGGAG CAGGCGAAAC GCTTGCCTGC GGAACCGGAG CCTGCGCCGT TGCCGTTGCC TGCGTGCTGA ACGGGTACGC CGGGCGTGAT GTGGAGGTGG AGCTTAAGGG CGGTTCCTTA CATATCCACT GGGATGAAGC CAGTAACCAC GTATACATGA CCGGCGGCGC GGTGACCGTT TTTTCCGGCG AATACTACAT TTGA
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Protein sequence | MAVALRFTKM QGIGNDYVYI NGFQERIDSP GELARKISDR HFGIGSDGLV LILPSATADV RMRMFNADGS ESEMCGNAVR CVGKYVYDHG IQVKDVITVE TRAGVKIVRL LFEAGKVCGA TVDMGEPELH PARIPVLTET SGDGSQQRFV ARPVDVNGQL YEITAVSMGN PHAVIFMKGI DDLDLPRIGP RFEHHPLFPK RTNTEFAEVI SSTKVRMRVW ERGAGETLAC GTGACAVAVA CVLNGYAGRD VEVELKGGSL HIHWDEASNH VYMTGGAVTV FSGEYYI
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