Gene Ddes_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1136 
Symbol 
ID7284818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1335999 
End bp1337069 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content57% 
IMG OID643581935 
ProductBile acid:sodium symporter 
Protein accessionYP_002479718 
Protein GI220904406 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID[TIGR00841] bile acid transporter 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0287814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCA ACTATTTATT GATAGTAACT TTTTTGTTCA CACTCTTGCC ATCCACACGC 
CAGTCTGACA GTATGCCGAT GTCCGCATAC TACGCCTCAG GCGGAGGAAA CACAGACTTG 
TTGCGTCTTG CGATCATCAT CAGCGCCGCC CTCACGCGCT ACATGGGCCT TGTGGTTATT 
GCCTGTTCCG CTCTGGCCCT TTGGCGGCCC GAGCTTTTCC GGTGGGTTGC TCCATACGTT 
ACCCCGCTTC TCGGACTTAT CATGTTCGGC ATGGGCATGA CTCTACGCGT GGGAGACTTC 
AGCCATGTGC TGGCCCGCCC ACGCCATATC GCTCTGGGCA TAGCCGCCCA GTTTGGCCTG 
ATGGCCCTGC TGGCCTTTGT TTTTTGCCAT GCCTGCTCCC TGCCGCCGGA CATGGCCATG 
GGCCTTGTTC TCGTTGGCAC AGCCCCCGGA GGCACCGCCT CCAATGTTCT GGCCTATATC 
GCCAAAGGCG ATGTGCCGTA TGCCGTAACA CTTACCTCCC TAGGTACTTT TCTCGCTCTT 
CTCTTCATGC CTGCCCTTAC ATGGCTTCTC GGTGGCGTGT GGATACCTGT AGATGTGGGC 
GGCCTTGTGG TTTCCATCAG CAAAATAGTG GTGGTCCCCG TACTTATGGG CCTTGCGGCA 
CACCGTTTTT GTGGTGGCCT GACCCGTCGC GCCCTACCCT TTTTGCCCCT GCTTTCCGCC 
CTGACCATTA CACTGGTAGT GGCAGGCATT CTGGCAATAA ATGCCGCAAA CATCCTGCAG 
GCCGGTCTGG ATATTTTTAT GGCCGTCATC TGCCTCAATC TTGCCGGCCT TGCTTTGGGC 
AGCCTGCTGG CCCGGATTTT CCGGCTTGAC CGCAGCACCG GCCGCGCCTT GTGCCTTGCA 
GTGGGTACCA AAAATTCCGG GCTTGCCACT GCGCTTGCCC TGGCCCACTT TTCACCTGCG 
GCAGCCATCG CCGGCGCCCT CTACAGCGTA TGGCAGAACA TTTCCGGAGC GCTGCTTTCC 
AATTTTTTTC ATACCCGCCC AATGGATATC ACCCCAAACA AGGAACTGTA A
 
Protein sequence
MTSNYLLIVT FLFTLLPSTR QSDSMPMSAY YASGGGNTDL LRLAIIISAA LTRYMGLVVI 
ACSALALWRP ELFRWVAPYV TPLLGLIMFG MGMTLRVGDF SHVLARPRHI ALGIAAQFGL 
MALLAFVFCH ACSLPPDMAM GLVLVGTAPG GTASNVLAYI AKGDVPYAVT LTSLGTFLAL 
LFMPALTWLL GGVWIPVDVG GLVVSISKIV VVPVLMGLAA HRFCGGLTRR ALPFLPLLSA 
LTITLVVAGI LAINAANILQ AGLDIFMAVI CLNLAGLALG SLLARIFRLD RSTGRALCLA 
VGTKNSGLAT ALALAHFSPA AAIAGALYSV WQNISGALLS NFFHTRPMDI TPNKEL