| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1115 |
|---|
| Symbol | |
|---|
| ID | 7284797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1309439 |
|---|
| End bp | 1310329 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643581915 |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_002479698 |
|---|
| Protein GI | 220904386 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0984258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAA TCGCTTCGCC GCAACTCGCC CAGCGTACAA CGCTGCACCT TGGCGGGACA
GCAATTGCAG AGCTGATTCT TGAAGGCCCC GAGGATATAG TTCCATTATC GCGCCGTTTG
CGCGCTTTGG GAGGAACCCC GGTCGTTTTG GGGGCCGGAA GCAATATTCT GGCCCAGGAT
GGCGACCTGC CCCTGGTTCT GATACGGCCG CTCTTTATGC AGGGACCAGA GGTGATTGGT
GAAAAAGAGG GCAGGGTGCT TGTGCGCGCC GGAGCGGGAA TGCCCCTGCC GAGGCTCTTG
CGTTTTTGCG CGGAGCAGGG CTTGGCAGGG CTTGAAGGGC TTGTGGGCAT ACCGGGTACC
GTTGGTGGGG CCGTAGCTAT GAATGCGGGC TCATTTGGTG TTGAAGTATG CGAAAAAATT
GAAAATTTAC AAATAGTTGA TGCCGATGGA GTACGCGCTG TTGCATCCTG CGCGCTACAG
TATGCCTACC GCAGCCTGTG TATTGATGAG AAAAAGAATG ATTTTATCGT CTTGGAAGCC
ACATTTGGCT TGACCAGAGC AGCGAGGGAT GGCATCACTA ATCGCATGCG TCACAACTTT
TTTGAGAAAA AGTCTAAACA ACCTGTGACG GCCTGGAGCG CTGGCTGCGT ATTCAAAAAT
CCCTCTGCGG AACTGCCTGC CGGCAAACTT CTTGATCAGG CGGGATTCAA AGGAAAAAAA
ATGGGCGGCA TGGCCTTTTC AACCCTGCAC GCCAACTTCA TGATTAATGA GGGCAGAGGC
AGCGCAAAAG CGGCCCTGGC CTTGTTGCAA GAGGCAAGAG AAACTGTGCG GGAACGGTTC
GGTGTCGTGC TTGAGCCCGA AGTCAGGATT ATTCCATGCC TCTTTCCTTG A
|
|---|
| Protein sequence | MREIASPQLA QRTTLHLGGT AIAELILEGP EDIVPLSRRL RALGGTPVVL GAGSNILAQD
GDLPLVLIRP LFMQGPEVIG EKEGRVLVRA GAGMPLPRLL RFCAEQGLAG LEGLVGIPGT
VGGAVAMNAG SFGVEVCEKI ENLQIVDADG VRAVASCALQ YAYRSLCIDE KKNDFIVLEA
TFGLTRAARD GITNRMRHNF FEKKSKQPVT AWSAGCVFKN PSAELPAGKL LDQAGFKGKK
MGGMAFSTLH ANFMINEGRG SAKAALALLQ EARETVRERF GVVLEPEVRI IPCLFP
|
|---|
| |