Gene Ddes_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1114 
SymbolmurC 
ID7284796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1308073 
End bp1309446 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content56% 
IMG OID643581914 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_002479697 
Protein GI220904385 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.713448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCA AGATCCGGCA CATCCACATG GTGGGCATTG GCGGCGCGGG TATGAGCGGC 
ATTGCCGAGG TACTGCTCAA TCTCAAATAC GAAATTTCCG GTTCGGATAT GAGCGATTCT
GCCGTTGTCC GGCATCTGCG CAGCCTGGGT GCGCGTATTG CGGTCGGGCA TGCGGCAGAA
AATGTAGGAG ACGTGCAGGT GCTGGTCAAG TCCACAGCCA TCAGCGATGA TAATCCCGAG
CTTGTGGAGG CTCGCAAGCG CAATATCGCC ATTATCCCCC GCGCTGAAAT GCTGGCCGAG
CTTATGCGTC TGCGCCAGGG CATTGCCATT GCGGGTACGC ACGGCAAAAC CACGACCACA
TCGCTTACTG CCTCGATTTT TGATGAAGCC GGTCTTGATC CCACTGTCAT CATCGGCGGG
CGTCTCAATG TTTACGGGGC CAATGCCCAT CTTGGGCATG GGGAATACCT GATTGCCGAG
GCCGACGAAT CTGACGGATC GTTTCTTTGC CTGTTGCCCA TCATCAACGT GGTGACAAAC
GTGGACGAGG ACCATCTGGA CCATTACAAA ACGCGGGAAG CCATAAACAG TGCCTTTGTG
CAGTTCATGA ACAATGTGCC GTTCTACGGC CTGAACATTG TTTGTGGAGA TGATCCCGGC
GTGCTGGAAC TTTTGCCGCA GGTAAAACGT CCGGTGCTTA CCTATGGCTT TGCCGAGGAT
AACGCCCTGC GCGCTGTGCC ACTGGAAAGC GGTCGGATCA GCCGCTTTCA GGTTTGGCTG
CATGATGAAA AACTGGGCGA AGTCAGTCTG CCGCAGCCGG GTCGCCACAA TATCCTCAAT
GCACTTGCCT CTATCGGTGC AGCCATGGAG GTGGGTATCA GCTTTGAAAA GTGTGCCGCG
GGCCTGTGTG GATTCAAGGG TGTGGGGCGT CGCTTTGAAT TCAAGGGCGA AAAACAGGGA
GTTACTGTGG TGGACGACTA CGGCCATCAT CCTGCTGAAA TCGCCGCGAC CCTTGCCACT
GCCCGCCAGG TTTTCGAAGG GCGGCGTATC GTGGCGGCGT TTCAGCCGCA CCGCTTCAGC
CGCACCGAAG CCCATTTTGG AGAGTTTTGC AAGGTTTTCA ACAATGTTGA CCAGTTGCTG
CTGACGGAAA TTTATGCAGC CTCTGAAAAT CCCATCCCCG GTGTTTCGGG GCAAAGTCTT
GCGCAGGGGA TTCGCCAGGT ATCCTCAACG CCTGTGGAAT ATTTTCAGAC GCTGGATGAC
CTTGCCCGGG CATTGCCGGA TATTCTGCAG GAAGGGGATG TGTTGCTGAC CCTGGGGGCG
GGCAACATCA CCCGTTTGGG GCCGACATGG CTGGAAGGGC TTGATCATGC GTGA
 
Protein sequence
MNSKIRHIHM VGIGGAGMSG IAEVLLNLKY EISGSDMSDS AVVRHLRSLG ARIAVGHAAE 
NVGDVQVLVK STAISDDNPE LVEARKRNIA IIPRAEMLAE LMRLRQGIAI AGTHGKTTTT
SLTASIFDEA GLDPTVIIGG RLNVYGANAH LGHGEYLIAE ADESDGSFLC LLPIINVVTN
VDEDHLDHYK TREAINSAFV QFMNNVPFYG LNIVCGDDPG VLELLPQVKR PVLTYGFAED
NALRAVPLES GRISRFQVWL HDEKLGEVSL PQPGRHNILN ALASIGAAME VGISFEKCAA
GLCGFKGVGR RFEFKGEKQG VTVVDDYGHH PAEIAATLAT ARQVFEGRRI VAAFQPHRFS
RTEAHFGEFC KVFNNVDQLL LTEIYAASEN PIPGVSGQSL AQGIRQVSST PVEYFQTLDD
LARALPDILQ EGDVLLTLGA GNITRLGPTW LEGLDHA