| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1109 |
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| Symbol | |
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| ID | 7284791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1301533 |
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| End bp | 1302951 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581909 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002479692 |
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| Protein GI | 220904380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATAA CCATTAATGA GGCGGCGGTT TGCCTGGGCT TGCCCGGAAC TTTGCCGGAT
GCGGAAAATA CCGTCCTGAC TTCGGTCGTG ACAGACAGTC GTGACGCAGG GCCAGGCGCG
CTTTTTGTCT GTGTACCCGG CAGCAGGGTG GACGGGCACG ACTTTGCCGC GGCGGCTGTG
AGGCAAGGCG CTGCTGCGGT GCTGGCCGCA GGGCCTTTGC CGGGCATCAA TGTGCCGGTT
CTGGTGGTCC CTGATACGGT CAAGGCCCTG GGGCAACTGG CCGGGCTGTG GCGTGACAGG
ACGAAGGCGC GCGTGGTGGC TGTTACCGGT ACGGCAGGCA AGACGACCCT CAAGGAAGTG
TTGGCCCAGG TTTTGTCCCT TGGTGGAAAG ACCGCCCGCA ATGCCATGAA CCATAATAAC
CAGATCGGTA TGCCCCGAGC GGTGCTCGGC ACAGACGGCG ACGAAAAGTT TTGGATTATG
GAAGCCGGAA TCAGCCAGCA AGGCGACATG GATGATCTGG GTTCAGTGCT ACGCCCGGAT
ATTGCGGTTG TGCTCAACGC CGGAACAGGC CACACTGAGG GGCTTGGCGA AAAAGGCGTG
GCCTGGCACA AGGCGCGTTT GCTCAAGTAC CTTGCCAAAG GCGGTAAAGG TCTTGTCTGC
GCTGATTATC CCGATCTGGT GCGTGAAGCA CGAGCCACGG AGACCGACAT CTGTTTCTTC
AGCGGCAGCG GCCGTGATGC GGAATTTCGC GCCGTTTATG CGGGTGCGGC TCCACAGGGG
GCTGCTGTTA CTCCGTCTGA TGCCTACGGC TTGTACCGCT TATGGCTAGG GGGCAGGGAG
TTTGACGTTA CGGCTCCTTT CAGGGGCGCG TATGGAGCTG AGAACGTGGC TGCCGTGGCT
GCCGTCGCCC ACATGCTCGG GCTGGACTTG CAGGCCATAC GGCAGGGGCT GGCGCAGGCC
CGCATGCCTG CGCAACGCTT CAATCAGGTG CAGGCAGGAT CGTGGCTGTT GATTGATGAT
ACGTACAACG CCAATCCACT GTCCATGGGC CGGATGCTGG ACGCAGCGGC TGAAAGGGCG
GCAGGGCGTC CTTTTGTGGC AGTGTTGGGC GCCATGCTTG AGCTTGGCAG CCAGGCAGCC
ATGGAGCATG AGGCCTTGGG CCGTCGCCTG GCCGGTCTGA ATCCCTCTGC GATTGTTTGG
AAGGGGCTTC ATGCGGAGGA TGTGCGCAAA GGTCTTACTT TGGCGGGTTA TGCCGGTCCC
TGGCAGGTCG TCACCGACGC CGGGGAGTTC ATGAAAACAT GGCAGACTCT GCAGGATTAC
GGTCTGGAAA ACAAGGCAGC CAAAAGTGGC GGCGTGGTTC TGTTTAAAGG TTCGCGCAGC
AACAGGCTCG AAACACTTGT GGCAGTCTTG AGCAGCTAG
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| Protein sequence | MRITINEAAV CLGLPGTLPD AENTVLTSVV TDSRDAGPGA LFVCVPGSRV DGHDFAAAAV
RQGAAAVLAA GPLPGINVPV LVVPDTVKAL GQLAGLWRDR TKARVVAVTG TAGKTTLKEV
LAQVLSLGGK TARNAMNHNN QIGMPRAVLG TDGDEKFWIM EAGISQQGDM DDLGSVLRPD
IAVVLNAGTG HTEGLGEKGV AWHKARLLKY LAKGGKGLVC ADYPDLVREA RATETDICFF
SGSGRDAEFR AVYAGAAPQG AAVTPSDAYG LYRLWLGGRE FDVTAPFRGA YGAENVAAVA
AVAHMLGLDL QAIRQGLAQA RMPAQRFNQV QAGSWLLIDD TYNANPLSMG RMLDAAAERA
AGRPFVAVLG AMLELGSQAA MEHEALGRRL AGLNPSAIVW KGLHAEDVRK GLTLAGYAGP
WQVVTDAGEF MKTWQTLQDY GLENKAAKSG GVVLFKGSRS NRLETLVAVL SS
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