| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1096 |
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| Symbol | |
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| ID | 7284778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1285737 |
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| End bp | 1288979 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643581897 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002479680 |
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| Protein GI | 220904368 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.528087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGC GTACGGATTT ACACAAAATT CTTGTCATTG GCGCGGGACC AATCATCATA
GGCCAGGGCT GCGAGTTTGA CTACTCCGGC TCACAGGCCG TCAAGGCCCT CAAAGAAGAG
GGCTACGAAG TGGTGCTGGT CAACTCCAAT CCCGCCACGA TTATGACCGA CCCGCAACTG
GCGGACGCCA CGTATGTGGA GCCGATCGAG CACGATACCT TGGCCGCCGT CATCCGGAAA
GAACGCCCCG ACGCACTTTT GCCTACTCTT GGCGGGCAGA CGGCATTGAA CGCCGCTCTT
GGACTTGCCA AGAGCGGCGT TTTAGCGGAA TACGGCGTTG AGCTTATCGG TGCGCAGGCC
GAAGTCATCG AAAAGGCTGA AAGCCGTGAG CTTTTTCGCG AGGCCATGGA AAAAATCGGC
CTCAAAATGC CCGCCAGCGG CATTGCCCGT ACCATAGATG AAGTGCGCCA GCTGGGCAAT
GTGCTGCCCT TTCCGCTTAT TGTCCGCCCG GCTTTTACCC TGGGCGGCAC AGGCGGCGGT
GTGGCCTACA ACCTCGCCGA TCTTGAAGAG GTCGCGGGCA ACGGCCTTGC CGCCAGCCCC
ACGTCAGAAG TGATGATCGA GCAGAGTGTA CTTGGCTGGA AAGAGATAGA AATGGAAGTG
ATGCGCGATG TCAATGACAA CTGCGTCATC ATCTGCTCCA TTGAAAATCT TGATCCCATG
GGGGTTCACA CGGGTGACTC CATTACCGTA GCCCCGGTAC AGACCCTTTC TGATGCGGAG
TACCAGCAGA TCCGCGATGC CTCCATCGCC ATCATGCGCG AAATCGGTGT GGAAACCGGC
GGCAGCAACG TACAGTTCGG CGTTAATCCG GCCAATGGCG AAATTGTGGT TATCGAGATG
AACCCGCGCG TATCGCGATC ATCGGCGCTG GCCTCCAAGG CCACCGGGTT TCCCATTGCC
AAGATTGCGG CCAAACTGGC CGTGGGCTAC ACACTGGATG AACTGCGCAA CGACATCACC
CGTGAAACCG TGGCAAGCTT TGAGCCGGCC ATTGACTACT GCGTGGTGAA AATTCCGCGA
TTCACCTTTG AAAAATTCCC CGGCGCAAAA GATGAACTGA CCACAGCCAT GAAGAGCGTG
GGCGAAGCCA TGAGCATAGG CCGTACCTTC AAGGAAGCCA TGCAAAAAGG GTTGCGGTCA
ATGGAAATAG GCGCTACAGG CCTTGGCTTC AATTTCAATG CCGAGCTTCC TGATCGCGAA
GCAATTCTGG AATCATTGCA GCGACCCAAC TCCCGCCGTA TTTTTGCACT GCGTCAGGCC
TTGCTCGCGG GCATCACGGA AGAAGAAATT TTTGCCGTGT CCGCCATTGA TCCCTGGTTT
GTGCGCCAGT TGCAGGACAT TGTCAGCATG GAACAGCGTA TCCGCAACTT TGGCCTTGCC
AATGACATGA CTGCCGGAAA TGAAGACCTG ACTGTCATCT TGCGCGAAGC CAAGGAATAC
GGCTTCTCCG ACAGGCAGCT TGCCGAGATG TGGAAACGTC CGGAGACGGA TATCCGCCGC
CTGCGCAAGG AGATGAACAT CCTGCCGACG TACTATCTGG TTGATACCTG CGCCGGAGAG
TTTGAAGCCT ATACTCCCTA TTTCTATTCG ACCTACGAAA AAGGCGACGA AATTAACCTG
GAGGACCGCC GTAAGGTGCT CATCCTTGGC GGCGGCCCCA ACCGTATCGG TCAGGGCATC
GAATTCGACT ACTGCTGCTG CCACGCTTCC TTTGCCTTGC GCGACGCCGG GGTAATGGCC
ATAATGGCCA ACTCCAACCC CGAAACCGTT TCTACAGACT ATGACACTTC GGACCGGCTT
TACTTTGAAC CGCTGACCTT TGAAGATGTC ATGAACATTG TGGAAACAGA AAAGCCCGAA
GGCGTTATCG TGCAGTTCGG CGGTCAGACT CCGCTGAATC TGGCCGTGCC TCTTATGCGA
GCCGGAGTTC CCATTCTCGG CACCAGCCCG GACGCCATTG ACCGGGCAGA AGACCGTGAA
CGCTTTCAGG CGCTGATTCA GAAACTTGGC CTGCTGCAGC CGCCCAACGG CACAGCCATG
AGCCTTGAAG ATGCTCTTGC CGTGGCCGAG CGCATTGCTT ACCCCGTTGT GGTGCGCCCG
AGCTATGTGC TTGGCGGACG GGCCATGGCC GTGGCCTACG ACGTTTCGGA ACTGACCGCC
TATTTTCACG CCCAGGTGCC GGAAAAGCCC AAACATCCCA TCTTGATCGA CAAGTTTCTT
GAACATGCCG TAGAAGTGGA CGTGGACGCC ATTTCTGACG GCAAGGACGT TTATGTTGCG
GGCATTATGG AACATATTGA AGAAGCGGGC ATCCATTCAG GCGACTCGGC CTGTGTGCTG
CCTTCCTATT CGCTGTCTTA TGATCATGTA GCCCTCATCG CCTCGCAGAC AGAAGCGCTT
GCCCGTGAAC TCAAGGTCAT TGGCCTGATG AATATACAGT TCGCCATCAA GGGTGATGAT
ATTTATATTC TTGAGGTCAA TCCCCGTGCC TCGCGCACTG CTCCTTTTGT ATCCAAGGCC
ACAGGCGTGC CCCTGCCATA TCTCGCTACC CAGGTCATGC TTGGCAAAAG CCTGGATGAA
CTGGACCCCT GGAGCATGCG CAAGGGCGGC TTTATCTGCG TAAAAGAAGC TGTCATGCCT
TTCCAGCGTT TTCCTGGTGT AGACGTGATT CTTGGCCCGG AGATGCATTC CACGGGTGAA
GTCATGGGCA TGGGGTCCAG CTTTGGCGAG GCTTTTCTTA AAAGCCAGCT TGGAGCGGGG
CAGGTGCCCC CACAGGGCGG CAAGCTTTTT CTTTCAGTCA ATGACCGCGA CAAGCCCTTC
CTGCCGGAAG TGGCCGAAAT GTTCGCCAGG TTGGGCTTTG AGCTTTTGGC CACCAAAGGT
ACGGCAGCTA TCCTGCGCGA ACACGGCCTG AAAGTAGAAG AAGTGCGTAA AGTTTATGAA
GGGCGGCCCA ATATTGTGGA CCTGCTTATC AACCACGAGG TCGCCCTGGT TGTGAATACC
GCCTCCGGCA AACATACCGC CAGGGATTCC AAGGCAATCC GCCAGGCGGC GCTGAACTAC
AAGGTACCTT ACTGCACCAC TATTGCAGCG GCACGCGCCA CGGCTACGGC CATAGGGTCG
CGCCGGGACG AGATTCATGT GGAAAGTTTG CAGGAATACT ACGCGCGGGA TGCGCGGGGG
TAA
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| Protein sequence | MPKRTDLHKI LVIGAGPIII GQGCEFDYSG SQAVKALKEE GYEVVLVNSN PATIMTDPQL
ADATYVEPIE HDTLAAVIRK ERPDALLPTL GGQTALNAAL GLAKSGVLAE YGVELIGAQA
EVIEKAESRE LFREAMEKIG LKMPASGIAR TIDEVRQLGN VLPFPLIVRP AFTLGGTGGG
VAYNLADLEE VAGNGLAASP TSEVMIEQSV LGWKEIEMEV MRDVNDNCVI ICSIENLDPM
GVHTGDSITV APVQTLSDAE YQQIRDASIA IMREIGVETG GSNVQFGVNP ANGEIVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELRNDIT RETVASFEPA IDYCVVKIPR
FTFEKFPGAK DELTTAMKSV GEAMSIGRTF KEAMQKGLRS MEIGATGLGF NFNAELPDRE
AILESLQRPN SRRIFALRQA LLAGITEEEI FAVSAIDPWF VRQLQDIVSM EQRIRNFGLA
NDMTAGNEDL TVILREAKEY GFSDRQLAEM WKRPETDIRR LRKEMNILPT YYLVDTCAGE
FEAYTPYFYS TYEKGDEINL EDRRKVLILG GGPNRIGQGI EFDYCCCHAS FALRDAGVMA
IMANSNPETV STDYDTSDRL YFEPLTFEDV MNIVETEKPE GVIVQFGGQT PLNLAVPLMR
AGVPILGTSP DAIDRAEDRE RFQALIQKLG LLQPPNGTAM SLEDALAVAE RIAYPVVVRP
SYVLGGRAMA VAYDVSELTA YFHAQVPEKP KHPILIDKFL EHAVEVDVDA ISDGKDVYVA
GIMEHIEEAG IHSGDSACVL PSYSLSYDHV ALIASQTEAL ARELKVIGLM NIQFAIKGDD
IYILEVNPRA SRTAPFVSKA TGVPLPYLAT QVMLGKSLDE LDPWSMRKGG FICVKEAVMP
FQRFPGVDVI LGPEMHSTGE VMGMGSSFGE AFLKSQLGAG QVPPQGGKLF LSVNDRDKPF
LPEVAEMFAR LGFELLATKG TAAILREHGL KVEEVRKVYE GRPNIVDLLI NHEVALVVNT
ASGKHTARDS KAIRQAALNY KVPYCTTIAA ARATATAIGS RRDEIHVESL QEYYARDARG
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