| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1051 |
|---|
| Symbol | hisD |
|---|
| ID | 7284733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1230940 |
|---|
| End bp | 1232244 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643581853 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_002479636 |
|---|
| Protein GI | 220904324 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.65424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATGCC GGACTTTGAC TCTGCATAAT GAGCAGGAGT GGCCCAAGCT TGCCCAATGG
CTGCAAGGCC GCAATAACCC CGGTGACGGG GTGGAAAGCG CTGTGCGCGA CATCATCGCT
GCTGTGCGCG AAAGGGGCGA CGAAGCCCTG GTGGAATATA CCCGTAATTT TGACTGCCCG
GATTTTGCGC CCCCACTGCT CGTCAGCGAG CAGGAAATCG CGCGCGCGGC TGCTTCTGTT
TCCATTGAAA ACAGAGAAAT CATCAGTCAG GCGGCCACGT ACATACGCTC TTTTCATGAA
GCGCAGACGG AAAAATCCTG GTTTACCACA CGCCCTGACG GCAGCATTCT CGGCCAGCAC
GTTTTGCCCG TCGATGCTGC CGGGCTGTAC GTGCCCGGCG GACAAGGCGG CAATACACCG
CTTATCTCAA GCCTGCTCAT GACAGCCATT CCGGCGCAGG TCGCAGGTGT GCCGCGTCTT
GCCATCTGCA CTCCGCCCCG CAAGGACGGC AGCGTCAACC CCCATATTCT TGCTGCGGCC
CACCTGCTGG ACATTGAAGA AGTATACCGC GTTGGCGGGG CCTGGTCCGT GGCGGGCATG
GCCTATGGCA CGCAAAGCAT GGCCCCGGTA GACGTCATCG CCGGACCGGG CAACATCTTT
GTCACCACAG CCAAACGCCT GGTGCAAGGC ACAGTGGGTA TCGACATGAT CGCTGGTCCC
AGCGAAGTGC TGATCCTGGC CGACTCTTCC GCCAATGCCG AATGGCTCGC AGCGGACATG
CTTTCTCAGG CCGAGCACGA CACCCTGGCA TCGGCAATCT GCGTTACTGA CGATCAGCGC
CTGGCCGACA ATCTCTGGCA GGAGCTCAAC AAACAGTGCG CCGCCCTGCC CAGAGCCACC
ACCGCAGCCC GCTCGCTTGA AGACTGGGGG GCCATTGTGG TCACGCCCAA CCTGAGTGTG
GCCGTAGCCG TGGCCAATAT GGTCGCTCCC GAGCACCTGG AAATCTGCAC TCGTGACCCT
TGGGCCGTTC TGCCCCACAT CCGCCATGCC GGGGCCATTT TTATGGGCCA GCATAGCCCC
GAGGCAGTGG GGGACTATTT CGCCGGTCCG AACCATGTGC TGCCCACATT GGGTACGGCC
CGCTTTTCTT CTGCCCTTTC TGTGCAGACC TTTTGCAAGA GAACCAGCAT CGTGGCAACG
TCCCCAACCT TTTTGCAGCA AAATATGCAA TCCATTGCCG CCCTTGCACG CATGGAAGGG
CTGGAAGCGC ACGCGCGCAG CGTTGAAGCG CGAGCCAAAA AATAA
|
|---|
| Protein sequence | MTCRTLTLHN EQEWPKLAQW LQGRNNPGDG VESAVRDIIA AVRERGDEAL VEYTRNFDCP
DFAPPLLVSE QEIARAAASV SIENREIISQ AATYIRSFHE AQTEKSWFTT RPDGSILGQH
VLPVDAAGLY VPGGQGGNTP LISSLLMTAI PAQVAGVPRL AICTPPRKDG SVNPHILAAA
HLLDIEEVYR VGGAWSVAGM AYGTQSMAPV DVIAGPGNIF VTTAKRLVQG TVGIDMIAGP
SEVLILADSS ANAEWLAADM LSQAEHDTLA SAICVTDDQR LADNLWQELN KQCAALPRAT
TAARSLEDWG AIVVTPNLSV AVAVANMVAP EHLEICTRDP WAVLPHIRHA GAIFMGQHSP
EAVGDYFAGP NHVLPTLGTA RFSSALSVQT FCKRTSIVAT SPTFLQQNMQ SIAALARMEG
LEAHARSVEA RAKK
|
|---|
| |