Gene Ddes_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1050 
Symbol 
ID7284732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1230033 
End bp1230914 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID643581852 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_002479635 
Protein GI220904323 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTG TGGTCAAAAC TGACATTACC GCCTACCCGC TGCTTTCACG CGGCAAGGTG 
CGCGACATCT ACAACGTGGA CGAAAAAACA CTGCTCATCG TTACCACAGA CAGAATGTCG
GCCTTTGACG TGATCATGAA CGAGCCTATC CCCTACAAGG GGGTAATTCT GAACCAGATC
ACCCTGTTCT GGATGGAAAA GTTCAAGAGC ATTATCCCCA ACCATCTGCT GGAAAGCGAT
GTGAACCGCT TTCCAGACAG ACTGGCCCCC TGGAAAGACG AGCTTGAAGG ACGCGCAGTG
CTTGTACGCA AGGCGGCCCC CCTGCCTGTG GAATGCATCG TGCGCGGCTA TATCACGGGG
TCCGGCTGGA GCGACTATCA GACCACCGGC ACCCTTTGCG GCTATACGCT GCCCCCCGGT
CTGCAGGAGT CCGACAAACT TGAGCCTGCC ATCTTTACCC CCTCTACCAA GGCAGAACTG
GGCAAGCATG ACGAAAACCT GAGCGTGGCC GAAGCTGCCC GCCTGCTGGG TGAAGACATG
GCCCGTCAGG TTGAGCAGAC CTCTCTGGCC ATCTACGAAG CCGGACGAGC CTATGCTGCA
AGCCGCGGCA TTATCGTGGC AGACACCAAA TTTGAATTTG GTTTTATCGA CGGCAGGTTG
CACCTCATTG ATGAAGTTCT CACTCCCGAT TCCTCGCGCT TCTGGCCTGC GGATCAGTAC
AAGGCCGGGC AGGGGCAGCC CAGTTTTGAC AAACAGTACC TGCGCGACTG GCTGAAAGCA
CAACCCTGGG ATATGCAGCC TCCACCGCCG CCCCTGCCTG AGGACATTAT AAAAATCACT
GCGGATAAAT ACAAAGAAGC CTACGAAATT ATTACAAAAT AA
 
Protein sequence
MKVVVKTDIT AYPLLSRGKV RDIYNVDEKT LLIVTTDRMS AFDVIMNEPI PYKGVILNQI 
TLFWMEKFKS IIPNHLLESD VNRFPDRLAP WKDELEGRAV LVRKAAPLPV ECIVRGYITG
SGWSDYQTTG TLCGYTLPPG LQESDKLEPA IFTPSTKAEL GKHDENLSVA EAARLLGEDM
ARQVEQTSLA IYEAGRAYAA SRGIIVADTK FEFGFIDGRL HLIDEVLTPD SSRFWPADQY
KAGQGQPSFD KQYLRDWLKA QPWDMQPPPP PLPEDIIKIT ADKYKEAYEI ITK